Pairwise Alignments

Query, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 625 a.a., dipeptide ABC transporter ATP-binding protein from Serratia liquefaciens MT49

 Score =  482 bits (1241), Expect = e-140
 Identities = 276/559 (49%), Positives = 366/559 (65%), Gaps = 39/559 (6%)

Query: 5   LLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
           +L VR+LSV F     TV+AVRN+S+ +DRGETLAI+GESGSGKSV+S A+M L++   G
Sbjct: 21  VLSVRDLSVQFQQQGDTVEAVRNLSFDLDRGETLAIVGESGSGKSVTSLALMRLVEQGGG 80

Query: 65  KISSGEILL---NGK--DLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREAL 119
            I SG +     NG+  DL        R V G  +AMIFQ+P++ LNPV+ VG Q+ E+L
Sbjct: 81  NIVSGTMPFRRRNGEVLDLAHARQGTLRTVRGADMAMIFQEPMTSLNPVFPVGEQIAESL 140

Query: 120 RTH-GIDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLI 178
           R H  +D+R A+  AL++   V +PE +  +++YPH+ SGG RQRVMIAMAL+ KP LLI
Sbjct: 141 RLHQAMDHRAARQAALQMLDLVRIPETKDVLNRYPHQLSGGMRQRVMIAMALSCKPALLI 200

Query: 179 ADEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESG 238
           ADEPTTALDVT+QA++L L++ LQ+E  MGV+ ITHD+GVV+E+ADRV+VM +G  VE G
Sbjct: 201 ADEPTTALDVTIQAQILQLIRVLQQEMQMGVIFITHDMGVVAEIADRVLVMRQGEQVEQG 260

Query: 239 TVREVYRNPQHPYTKKLIAAAPGKGQLHE-------PSTDG--------------EPILK 277
            VRE++  PQ PYT+ L+AA P  G + +       P  +G               PIL+
Sbjct: 261 PVRELFAAPQQPYTQALLAAVPRLGSMADLDFPAKFPLPNGADNGGPQDTVPPGATPILR 320

Query: 278 VRNARKSYG-----------GFEALKGISFDLKAGETVAVVGESGSGKSTLARILLRLDD 326
           V N    +               A++ +SFDL  GET+ +VGESG GKST  R LL+L D
Sbjct: 321 VENLVTRFDLRSGILNRVTRRVHAVENVSFDLYPGETLGLVGESGCGKSTTGRSLLKLVD 380

Query: 327 PDSGTAHWKGQDLFTLSPSELFKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEIL 386
              GT  + G+ +  L    L  LRRD+Q +FQDP  SL+PR+TV   I E  ++H    
Sbjct: 381 SQRGTITFDGRQINQLKGPALQHLRRDIQFIFQDPYASLDPRLTVGFSIMEPLLVHNVAR 440

Query: 387 PKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVSAL 446
            KA  + R A LLERVGL PEH  RYPH+FSGGQRQRI IARALAL P++++ DE+VSAL
Sbjct: 441 GKAA-QERVAWLLERVGLKPEHARRYPHEFSGGQRQRICIARALALNPKVVIADESVSAL 499

Query: 447 DVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDN 506
           DVS+QAQ+V LL  L+RE GIAF+FI+HD+ +V   +  V VM  G++VE G    VF+N
Sbjct: 500 DVSIQAQIVNLLLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEN 559

Query: 507 PQQRYTQALISATLDPDPD 525
           PQ  YT+ L++A    DP+
Sbjct: 560 PQHAYTRKLMAAVPVADPN 578