Pairwise Alignments

Query, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 597 a.a., ABC transporter ATP-binding protein from Dickeya dadantii 3937

 Score =  462 bits (1188), Expect = e-134
 Identities = 253/559 (45%), Positives = 360/559 (64%), Gaps = 36/559 (6%)

Query: 1   MADHLLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLID 60
           M   +L V  L+  F      +K V+++S+ +   ET+A++GESGSGKSV++ +IM L+ 
Sbjct: 1   MNQPVLRVEQLNTAFRVNGEWLKVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLLG 60

Query: 61  MPPGKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALR 120
            P  + + G +L +G+DLL + A + + + G  I M+FQ+P++ LNPV  +G Q+ E LR
Sbjct: 61  GPQVQ-TRGRVLFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLR 119

Query: 121 TH-GIDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIA 179
            H G+D+  A+ EA RL +RV +P     +D+YP  FSGG RQRV+IA+ALA  P LLI 
Sbjct: 120 RHRGMDHAGARAEAARLLERVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACNPRLLIV 179

Query: 180 DEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGT 239
           DEPTTALDVT+QA++LAL+K LQ E GM +L ITHD+GVV+EVADR +VM  G  VE   
Sbjct: 180 DEPTTALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMAD 239

Query: 240 VREVYRNPQHPYTKKLIAAAPGKGQL------------------HEPSTD----GEPILK 277
            R+++R PQHPY+K L +A P  G++                   EP  D    GEP+L 
Sbjct: 240 TRQLFRAPQHPYSKTLFSAVPRLGEMADTRLPRRFALFGQSAAASEPLADTVTPGEPVLA 299

Query: 278 VRNARKSY-----------GGFEALKGISFDLKAGETVAVVGESGSGKSTLARILLRLDD 326
           VR+  K +           G   A++ +SF L+ GET+++VGESG GKST  R +LRL +
Sbjct: 300 VRDLIKRFDVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTTGRAILRLLE 359

Query: 327 PDSGTAHWKGQDLFTLSPSELFKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEIL 386
           P+ G     G+++ T   S L  LR   QM+FQDP  SLNPR+TV   I+E  + H  + 
Sbjct: 360 PNGGAVSLCGENMLTAGTSALAGLRMRAQMIFQDPYDSLNPRLTVGSAIAEPMISH-GLA 418

Query: 387 PKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVSAL 446
              +   + A+LLE+VGL  +   RYPHQFSGGQRQR+ IARALAL PQ+I+ DEA+SAL
Sbjct: 419 SARQAPQKVAQLLEKVGLQADMAARYPHQFSGGQRQRLCIARALALNPQVIIADEALSAL 478

Query: 447 DVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDN 506
           D++V+AQ+V LL  L++++G+A++FI+HD+ +V   +  V VM +GE+VE G    VF++
Sbjct: 479 DMTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFND 538

Query: 507 PQQRYTQALISATLDPDPD 525
           PQ  YT+ L++A   PDP+
Sbjct: 539 PQHPYTRRLLAAVPVPDPE 557