Pairwise Alignments

Query, 419 a.a., ABC transporter substrate binding protein (glycerol-3-phosphate) from Agrobacterium fabrum C58

Subject, 421 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 25/346 (7%)

Query: 16  LAAGVSS----ADAATTVRFWHSFNKSNGEALDKIIAGFEAANPDTDIEAEYIGSYNDII 71
           L AG S+    A  A  + +W     +  +A+D++IA F+ ANPD  ++ +    Y D  
Sbjct: 14  LVAGFSTFAFNAAQAVEIEYWQYVFDTRVKAMDELIAEFQKANPDITVK-QVTFPYADYQ 72

Query: 72  AKLQAAIPARRAPDAVILEVTRYGLFANNNLLTDLTP-YFDADPLKDDLYDYAREVGVIN 130
            ++ AA  + + PD + L       FA   +L  L    F  D ++ + +     +    
Sbjct: 73  TRVIAANLSGKGPDVMQLFYGWLDKFAAGGILQPLPKDAFPHDKIESEFFPIVSAMK--R 130

Query: 131 GKNYV-VPFNSSTPVLYFNKDIFARAGLPADTPLKTFEDISTAAKTIT--EKLGSQGISG 187
           G +Y  +P    +  L++NK +F  AGL A  P KT ++   AA+ I   +  G+  ++G
Sbjct: 131 GDDYYGLPTAVRSLALFYNKKLFTEAGLDAANPPKTLDEFVAAAEKIAKHDAAGNLTVAG 190

Query: 188 --IAAPGQFARWG---LVMANDSEMIDPKTGEIVLDKPNTIEAYQWMASLVKDSKVASPD 242
             +   GQ  +W    L+     E       ++  +    I+A ++  SL  + K+    
Sbjct: 191 STLDMGGQDHQWWREVLIRQYGGEPYADNDQKVTYNSEPGIQALKFYTSLQLEKKIGQ-- 248

Query: 243 GVTEEDNGRDAFLARKVGIMMNSTGNYVGSKKALGGDLVVRPMPCN----KTCSVPIGGA 298
            V   D G+ AF A K G+ ++ T      +     +  V  +P N    ++        
Sbjct: 249 -VGFMDEGQAAFRAGKAGMTIDGTFRLGSFRTIKDFEWGVTELPTNDKNIRSNYASYFAN 307

Query: 299 GIGIMSTSEKDVQDAAYKFISYAASPEANATWFAGTGYLPINKKSA 344
           GI   +T E+   +A+ KF++Y +SPEA A W    G LP  + +A
Sbjct: 308 GISAKTTGEE--LEASKKFLAYISSPEAMAIWLKTVGELPARRSAA 351