Pairwise Alignments

Query, 345 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score =  192 bits (487), Expect = 3e-53
 Identities = 112/303 (36%), Positives = 163/303 (53%), Gaps = 13/303 (4%)

Query: 36  MPDRVEPCLAMLKPVPPTGPDWAYEIKWDGYRLAVHIEPKGVRIITRGGHDWTHRFPTIA 95
           +P++  P LA L    P G DW YEIK+DGYR+   I+   VR+ TR GHDWT   P   
Sbjct: 202 LPEQFTPQLATLVDRAPEG-DWQYEIKFDGYRMLARIQAGEVRLFTRNGHDWTECLPRQV 260

Query: 96  AAAKRLGIGTAILDGEAVVLNSEGRSDFGALQRSLG-GRGGKRASSESILFAFDLLYFDG 154
            A + L +  + LDGE V LN +G  DF ALQ +   GR     S + + + FD  + +G
Sbjct: 261 KALQALKLKDSWLDGEVVSLNGDGLPDFQALQNAFDIGR-----SLDIVYYLFDAPFLNG 315

Query: 155 HDLTKTELSVRRHLLTDLLDGAVGAI-QLSEEVAGEGAELLENARSLGLEGIIAKHRDSP 213
            D  +  +  RR  L + L G+   + + SE       ++ E+A  L LEG+I K   SP
Sbjct: 316 EDRRQAPVEERRAALKEALAGSRSTLLRYSEAFTAHHRDIFESACDLALEGVIGKRLGSP 375

Query: 214 YRPGRTGDWLKIKCIQSESFMIVGYEQSAAARGGVGSLLLAARRDHDWVYVGAVGTGFKE 273
           Y   R+ DW+K+KC  S+ F+IVGY +   +R G G+LLLA   D   VY G VGTGF +
Sbjct: 376 YVSRRSADWIKLKCRLSQEFVIVGYTRPQGSRSGFGALLLAVNNDTGLVYAGRVGTGFDQ 435

Query: 274 KDAAYLKKTLDTLKTRT-----PVVPLKGKNYVFAQPTLIAEIEFRGWTDDGNLRHASYK 328
                +   L  L+  T     P+   + +   + +PTL+A+++F  WT +  +R A++ 
Sbjct: 436 AALKAIYAQLTPLECETSPLAKPLSSAQARGVHWVKPTLVAQVQFAEWTREDVVRQAAFV 495

Query: 329 GLR 331
           GLR
Sbjct: 496 GLR 498