Pairwise Alignments

Query, 270 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 273 a.a., non-homologous end joining protein from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 2e-33
 Identities = 73/269 (27%), Positives = 141/269 (52%), Gaps = 5/269 (1%)

Query: 4   RPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETQNRVVSHYVDSVTGKEVKDEDE 63
           R  WKG +   LV  PV +  A   +E+V F  L++ +   V    V+ VTGKE+  ++ 
Sbjct: 3   RAIWKGAISFGLVHIPVALNTAV-RTERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDNI 61

Query: 64  VKGYQRGENEYIILEDEELENVALDSTKTIDISTFTPRDSVEWIWLDTPYYLSPNDPVGQ 123
           VKG +  +  Y+++ +EE+     ++T+TIDI +F     +     DTPYYL+P D  G 
Sbjct: 62  VKGVEFEKGRYVVISEEEIRKARPETTQTIDIFSFVEAGDIPLQHFDTPYYLTP-DRRGG 120

Query: 124 EAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDT--YFA 181
           + ++++R+ +E    V ++ +V+  R+   +L P    +V+ TLR+ +EVR  +T    A
Sbjct: 121 KVYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETLELDA 180

Query: 182 GIDDEETADREMMPLVQQLIKKQTKHWDAKMVIDPVQERLLDIIAAKKKALKKSARAKPS 241
            + D +   RE + + ++L++  +  W  +   D  ++ ++D++  K    K  A  K  
Sbjct: 181 SVTDSKVEKRE-LEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVEEKASKGKIEAVEKGD 239

Query: 242 APAKSTPSNVINIMDALKKSVAAENRSSK 270
             A    ++++++ + LK+S+  +    K
Sbjct: 240 TGAAEKGADILDLTELLKRSLGGKKPVKK 268