Pairwise Alignments

Query, 258 a.a., exodeoxyribonuclease III from Agrobacterium fabrum C58

Subject, 270 a.a., exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI from Pseudomonas putida KT2440

 Score =  138 bits (347), Expect = 1e-37
 Identities = 92/270 (34%), Positives = 131/270 (48%), Gaps = 16/270 (5%)

Query: 1   MKLATYNVNGINGRLEVLLRWLAEAKPDVVCLQELKAPNDKFPRREIERAGYGAIWRGQK 60
           MK+  +N+NG+  R   L   + + +PDV+ LQE K  +D+FP  +++  GY   + GQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 61  SWNGVAILARDQEPRETRRGLPGDPDDSHSRYI-----EAAIDGIVIGCLYLPNGNPAPG 115
              GVA+L+R Q P    +G   D +D+  R+I     +A    I I   Y P G     
Sbjct: 61  GHYGVALLSR-QPPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDH 119

Query: 116 P-KFDYKLRWFERLYSYAAELFELDVPVALVGDFNVMPTDLDV----YKPERW--RDDAL 168
           P KF  K R++  L +     F  D PV ++GD N+ P D D+       +RW       
Sbjct: 120 PTKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCS 179

Query: 169 FRPEVRAAYAELIAMGWTDAVRLLHPEERIYTFWKYFRNAFARD---AGLRIDHFLLSPS 225
           F PE R     L   G  D+ R L+P+      W  +R+    D    GLRID  + S  
Sbjct: 180 FLPEEREWMERLKGWGLVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQ 239

Query: 226 LRERLQTCGVDKFARAWEHTSDHAPVWIEL 255
           L  R++  GVD   R  E  SDHAP+W+EL
Sbjct: 240 LVPRIKAAGVDYELRGMEKPSDHAPIWLEL 269