Pairwise Alignments

Query, 566 a.a., ATP-dependent DNA helicase from Agrobacterium fabrum C58

Subject, 728 a.a., DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex from Pseudomonas putida KT2440

 Score = 58.9 bits (141), Expect = 7e-13
 Identities = 75/285 (26%), Positives = 113/285 (39%), Gaps = 33/285 (11%)

Query: 9   VVSACAGSGKTKTAVHRVAAMQNRLTDRIGRILLLSFSNVAVETFQREYGMLVTNDKRRI 68
           +V A AGSGKT+  VHR+A +          IL ++F+N A    ++    L+      I
Sbjct: 29  LVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILSVTFTNKAAAEMRQRIEQLLG-----I 83

Query: 69  GPI-VEIDTVDGFLTKNLLRPHGHRVMGCDRCPFL-VDGREPFLKHFT----VWDGSKPA 122
            P  + + T  G L   LLR H            L  D ++  +K       + +   PA
Sbjct: 84  NPAGMWVGTFHG-LAHRLLRAHWQEARLVQNFQILDSDDQQRLIKRVMRELGLDEQKWPA 142

Query: 123 RTADLRIT------------MDGGKFSFRVGKWAGTAISRTPAVEALEKLGAVGAYTHES 170
           R A   I               GG       +   TA       +A E+ G +       
Sbjct: 143 RQAQWFINGQKDEGLRPQHIQAGGDLFLATMREVYTAYE-----QACERAGVID---FSE 194

Query: 171 ARYWAYRLLNEVPFVLRAIARRYSHILVDEAQDIGTIHQALLEKISDAGAELSLIGDVNQ 230
               A  L  + P +L    RR+ H+LVDE QD   +  A L  ++  G  L  +GD +Q
Sbjct: 195 LLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLARGGDSLMAVGDDDQ 254

Query: 231 GIFEFTGATGDFLGNYHSR-AGVTAKELNRNFRSVPSIVKIANQL 274
            I+ + GA  + +  Y +         L +N+RS   I+K AN L
Sbjct: 255 SIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANAL 299