Pairwise Alignments

Query, 346 a.a., phage-related integrase from Agrobacterium fabrum C58

Subject, 308 a.a., recombinase from Pseudomonas simiae WCS417

 Score = 89.7 bits (221), Expect = 9e-23
 Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 30/255 (11%)

Query: 93  GPHAPSTVRRRLANWSTLTRWRGLHGAFASPALKSAIRLAVRAVPRTRA--RKSAKAVTG 150
           G  A +T++ RL   S L +W    G F  P     +R  ++ +        K A+ +  
Sbjct: 51  GVLAVNTLKLRL---SALAQWHTSQG-FPDPTKAPVVRKVLKGIRAVHPAQEKQAEPLQL 106

Query: 151 DVLAKLLATCESDS----------LRDLRDKAILMVAFASGGRRRSEIAGLRREQLTIEA 200
             L +++A+ ES++          LR  RD A++++ F  G R   E+  L         
Sbjct: 107 KHLEQVVASLESEAKAAAHDLPRLLRAKRDTALILLGFWRGFRS-DELCRLE-------- 157

Query: 201 PIETEGGPPLPSLAIHLGRTKTTSGEEDDT----VFLTGRPVEALNAWLAAAKIDKGSVF 256
            IE     P   ++++L R+K+       T      L   PV+A N WL+A+ + +G VF
Sbjct: 158 -IEHVHATPGAGISVYLPRSKSDRDNLGKTYHTPALLRLCPVQAYNEWLSASALVRGPVF 216

Query: 257 RGIGRWGTVSRRALDPQSVNAILKQRAEMAGLEAGQFSAHGLRSGYLTEAANRGIPLPEA 316
           RGI RWG +    L P SV  +L+Q  E AG+ A Q+++H LR G+ T A   G  L   
Sbjct: 217 RGIDRWGNLGEEGLHPNSVIPLLRQALERAGIPAEQYTSHSLRRGFATWAHRSGWDLKSL 276

Query: 317 MEQSRHRSVQQASSY 331
           M       ++ A  Y
Sbjct: 277 MSYVGWSDMKSAMRY 291