Pairwise Alignments

Query, 404 a.a., replication initiation protein RepC from Agrobacterium fabrum C58

Subject, 425 a.a., replication initiation protein RepC from Agrobacterium fabrum C58

 Score =  326 bits (836), Expect = 7e-94
 Identities = 180/413 (43%), Positives = 254/413 (61%), Gaps = 19/413 (4%)

Query: 1   MEGGQVTTPFGRRPVTLALVKRQIATTKIEEGKSADKWRVFRDASEAREVLGLQDRSLAV 60
           M+   VTTPFGRR ++  ++  Q A  K  + ++ DKW+++R   EAR +LG+ DRSLAV
Sbjct: 1   MDSTCVTTPFGRRAMSFGVLATQFAAQKTRKVEAVDKWKLYRSVCEARPLLGVTDRSLAV 60

Query: 61  LDALLSFYPENELRQDAQLVVFPSNIQLSIRAHGIAGATLRRHLALLVEAGLIIRKDSAN 120
           L+ALLSFYP+NEL  +A LVVFPSN QLS+RAHG+A  TLRRHL+ LVEAGLIIRKDS N
Sbjct: 61  LNALLSFYPKNELSSEAGLVVFPSNTQLSLRAHGMAEQTLRRHLSALVEAGLIIRKDSPN 120

Query: 121 GKRYARKDDEGSIEHAFGFDISPLLMRAEELACLAQQVAADRIAFRRAKESLTICRRDIR 180
           GKRYARK   G I  A+GF ++PLL R  E+  LA+++ ++R+  +R +ES+++CRRDI+
Sbjct: 121 GKRYARKHRGGEISEAYGFSLAPLLARKTEIEELAERIISERLDLQRLRESISLCRRDIQ 180

Query: 181 KLITAGVEEGASGDWSGLEERYLALVGQIPRNPTLNELSDLGAKMASLREDILKLLNSDD 240
           KL       G    + G + RY A+   + RN    EL ++   +ASLR ++   L + +
Sbjct: 181 KLCEMIAAHGDLKTFDGFQTRYNAIANSLGRNSKAAELKEIAGFLASLRAEVTNYLENIE 240

Query: 241 FSSEMTTNDAQIERHIQNSNTNHLNELEP-------SSGNEQGAKPSQNKQAGHVPIKAF 293
            S +   ND Q ER I+NS +  ++E +        +  +   A+P+        P+   
Sbjct: 241 KSEKSGGNDCQNERLIKNSESESISERQDLREAVTVAPASTAIAQPTYVAPISAKPVPPS 300

Query: 294 P------------IGLVLRACPEISNYGPEGQIGSWRELMTAAVVVRSMLGVSPSAYQEA 341
           P            I LVL+ACP+IS Y P G I  WR+L  A  V+++M  VS SAYQEA
Sbjct: 301 PKAVLHKQFFVPDIVLVLKACPDISLYAPGGAITGWRDLEVATSVIKTMFNVSQSAYQEA 360

Query: 342 CEIMGPENAAVTIACILERGGHINSPGGYLRDLTSKAKRGEFSLGPVLMALLR 394
               G +  A  +AC+L++   I+S GGYLR+LT KA+ G F +  +L+A LR
Sbjct: 361 LTTFGRQGTAAILACLLQKADQISSLGGYLRNLTRKAQEGCFDMQTMLLAQLR 413