Pairwise Alignments

Query, 305 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 347 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  227 bits (579), Expect = 3e-64
 Identities = 123/270 (45%), Positives = 173/270 (64%), Gaps = 4/270 (1%)

Query: 18  DGTFETQLPGLKLIRCSETTLPMPVVYEPTLCLVAQGRKQAVLGQTSFVYDPSSYLVASV 77
           DGT  T +PGL +   S+   P      P L L+AQG K+ ++G   +VYDP  YLV SV
Sbjct: 58  DGTVITAVPGLHVFCISKPEGPKHAFASPALGLIAQGSKRIIVGDDIYVYDPMHYLVTSV 117

Query: 78  DLPVMGSVIEASKDKPYLSMQLDLDTVELADLAI--RYPSEQHAPINGPIGLLLNKVDEG 135
           DLPV G V  AS ++PYL ++L+L   ++ +L    + P++ +AP +   G+ +N++   
Sbjct: 118 DLPVCGQVRVASNNEPYLGLRLELALDDIGELIRDDKLPAKANAPASR--GMYVNRIAMP 175

Query: 136 IIDAASRLLALLDTPRDIDALSPLAKREILYRLITGVGGAALRQIVQAGAHVNQIARSIV 195
           +++   RLL LLDTP D+  ++PL KREI+YRL+    GA LRQI    +H  +IA++I 
Sbjct: 176 VLEPVLRLLRLLDTPEDVPIMAPLIKREIMYRLLVNGEGARLRQIALQDSHTQRIAKAIS 235

Query: 196 WIRKHFRETCSVEAGAEVAGMSRSTFHAHFKAVTNMSPLEFRTQLRLQEARRLMLSEGLD 255
            +R ++ ++  VE  A    MS S+FH HFKAVT MSPL+++ QLRLQEARR ML  G D
Sbjct: 236 ALRVNYAQSLRVEDMARAVHMSVSSFHHHFKAVTAMSPLQYQKQLRLQEARRQMLIAGAD 295

Query: 256 AATAGFQVGYASPSQFSREYGRVFGMSPAK 285
            A+A   VGY SPSQF+REYGR+FG  P +
Sbjct: 296 VASAAHNVGYESPSQFAREYGRMFGAPPLR 325