Pairwise Alignments

Query, 305 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 306 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  227 bits (579), Expect = 2e-64
 Identities = 123/283 (43%), Positives = 175/283 (61%), Gaps = 4/283 (1%)

Query: 11  IARHAPHDGTFETQLPGLKLIRCSETTLPMPVVYEPTLCLVAQGRKQAVLGQTSFVYDPS 70
           I RHA       + +  L L+R +E    +P + +P LC++AQG K   LG   + YDP 
Sbjct: 22  INRHAGEPFGPASAIDDLYLVRYTENVRSVPTLAQPALCILAQGSKSLFLGDEQYAYDPL 81

Query: 71  SYLVASVDLPVMGSVIEASKDKPYLSMQLDLDTVELADLAIRYPSEQHAPINGPIG--LL 128
            Y+V SV LP+    ++AS + P L +++DLD  E++ L I        P N P G  L 
Sbjct: 82  HYMVVSVTLPLSAVRLDASPENPSLGLRMDLDPAEISQL-IAESGPMLVP-NRPSGRGLY 139

Query: 129 LNKVDEGIIDAASRLLALLDTPRDIDALSPLAKREILYRLITGVGGAALRQIVQAGAHVN 188
           + + D  ++DA  RLL LLDTPRDI  L+PL +REILYRL+ G  G  L +I  A +  +
Sbjct: 140 VERTDAALLDALLRLLRLLDTPRDIAMLAPLFRREILYRLLRGPQGYRLYEIALANSQTH 199

Query: 189 QIARSIVWIRKHFRETCSVEAGAEVAGMSRSTFHAHFKAVTNMSPLEFRTQLRLQEARRL 248
           ++ ++I W+  +F++   +E  A    +S ST H  FKAVT+MSPL+++ QLRLQEARRL
Sbjct: 200 RVCQAITWLNNNFQQPLRIEDLAREVNLSTSTLHHRFKAVTSMSPLQYQKQLRLQEARRL 259

Query: 249 MLSEGLDAATAGFQVGYASPSQFSREYGRVFGMSPAKHANALR 291
           ML++GL+AA A ++VGY SPSQFSREY R++G  P +    LR
Sbjct: 260 MLNDGLEAAVAAYRVGYESPSQFSREYSRLYGAPPIRDVARLR 302