Pairwise Alignments

Query, 498 a.a., IS21 family transposase from Agrobacterium fabrum C58

Subject, 516 a.a., Mobile element protein from Variovorax sp. SCN45

 Score = 61.6 bits (148), Expect = 6e-14
 Identities = 86/341 (25%), Positives = 128/341 (37%), Gaps = 36/341 (10%)

Query: 142 AHFFVLDLPHSDGCYVRAYPAAVSEAWVDGHIHAFAFFRAVPQSIVYDNDRCLVA---KI 198
           A  FV  L  S+  Y  A     +  W+   + A  FF  VP+ IV D  R L+    + 
Sbjct: 169 AQIFVAALGASNYTYACATARQTTADWIGAQVRALEFFGGVPRLIVPDQARALIKSPDRY 228

Query: 199 LPDGTRKRAALFSGFLSHYLIRDRYGRPGKGNDKGNVEGLVGYARRNFMVPI--PQFPTW 256
            P+  R    L+  F +HY       RP    DK  VE  V    R  +  +   +F + 
Sbjct: 229 DPEPNR----LYDEFATHYGCALLAARPAHPRDKPKVENAVLVVERWILARLRNRRFFSL 284

Query: 257 EAFN---VWLEEQCRKRQRDKLRGESETIGERLQRDLAAMRMLPASPFDACDHAGVKVTA 313
              N     L     +R   KL G   +  E L  D  A+R LPA  F+AC     KV  
Sbjct: 285 GELNRAIAALLVDLNQRPFKKLPGCRRSAFEML--DAPALRPLPAERFEACLWKSAKVNI 342

Query: 314 QSLARYKTNDYSVPVAYGHQDVWVRGYVNEVVIGCRGEIIARHPRSWDREDVVFDPVH-- 371
                +  + YSVP A     V +R   + V      + +A H  S  +      P H  
Sbjct: 343 DYHVEFDGHYYSVPHALVRTTVELRVTASLVECFAANQRVACHALSHRKGAHTTTPEHMP 402

Query: 372 -----YLPLIEQKINSLDQ-----AAPLQGWDLPEEFATLRRLMEGRMAKHGRREYVQVL 421
                +L    QK+    +     AA +  W L                + G R  + + 
Sbjct: 403 ASHRAHLEWTPQKLIDWGRRIGVSAAAVVTWQLEHR----------PHPEQGYRACLGLQ 452

Query: 422 RLLESFELADLHAAVKQALQLGAIGFDAVKHLILCRVERRP 462
           RL   +  A L AA  +AL + A  + +V  ++   ++R+P
Sbjct: 453 RLAREYTPARLEAACARALAIRAPTYRSVASILKSGLDRQP 493