Pairwise Alignments

Query, 498 a.a., IS21 family transposase from Agrobacterium fabrum C58

Subject, 340 a.a., IS21-like element IS100 family transposase from Escherichia coli ECOR38

 Score = 71.2 bits (173), Expect = 5e-17
 Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 15/254 (5%)

Query: 2   ELYLKVRLAVSEGMTRRQAAKYFNISRDSVAKMV-SYSTPPGYQRQLPIRRPKLDAFVST 60
           E  +++++   +GM+ R  A+   ISR++V + + + S PP Y       RP + + +  
Sbjct: 5   ETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTP-----RPAVASLLDE 59

Query: 61  IDHWLDEDVKVPRKQRHTAKRVFDRLRDERGFTGGYTIIKDYMRERD-QRRQEVFVPLAH 119
              ++ + +      +  A  +   +RD+ G+ GG TI++ ++R     + QE  V    
Sbjct: 60  YRDYIRQRIADAHPYKIPATVIAREIRDQ-GYRGGMTILRGFIRSLSVPQEQEPAVRFET 118

Query: 120 PPGHG-QADFGEALVVIGGVERKAHFFVLDLPHSDGCYVRAYPAAVSEAWVDGHIHAFAF 178
            PG   Q D+G     +       H FV  L +S   Y+        +     H +AF F
Sbjct: 119 EPGRQMQVDWG----TMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRF 174

Query: 179 FRAVPQSIVYDNDRCLVAK--ILPDGTRKRAALFSGFLSHYLIRDRYGRPGKGNDKGNVE 236
           F  VP+ ++YDN + +V +      G  +       F        R  RP +   KG VE
Sbjct: 175 FGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVE 234

Query: 237 GLVGYARRNFMVPI 250
            +V Y R +F +P+
Sbjct: 235 RMVQYTRNSFYIPL 248