Pairwise Alignments
Query, 499 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58
Subject, 507 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45
Score = 340 bits (873), Expect = 5e-98
Identities = 186/491 (37%), Positives = 305/491 (62%), Gaps = 8/491 (1%)
Query: 5 LIELRHIGKRFGGVKALDDVSLSIRPGEIHCLAGENGSGKSTVIKIMSGVYTPEDGEILI 64
L+EL+ I KRFG +AL V ++ GEIH L GENG+GKST++ I+ G++ P++GE +
Sbjct: 7 LLELKGISKRFGASRALTGVDFTLHAGEIHALCGENGAGKSTLMNIIDGIHQPDEGETSL 66
Query: 65 DGKPVGKLDPVKSVHHGIQVIYQDFSLFGNLTVAENLAINTFLMEGRKTVDWRHVRELAQ 124
DG+ V P ++ GI +++Q+ +L G+ TVAEN+ + +++ + E A
Sbjct: 67 DGRKVVIDGPAHAMRLGIGLVHQEIALCGDATVAENIFMPEINAGKHAWMNYASLNERAA 126
Query: 125 KALDRLGVSIDLDTDVETLPTSGKQIVAIARAVMADARLIIMDEPTTALTRHEVDALFKI 184
+ L RLG +D V+ L S +Q++ IA+A+ D +++I+DEPT ALT +E ALFK+
Sbjct: 127 RVLQRLGQDVDPAALVKDLSISTQQLIEIAKALTLDCKVLILDEPTAALTDNESAALFKV 186
Query: 185 VRDIQAQGIAVLFVSHKMREMLEISERLTVFRNGKKVAEGPIAEFDEPAITRAMTGQELT 244
+ D++AQGI ++++SH+M E+ R+TV R+G+ V GP+AE D A+ R M G++L
Sbjct: 187 LHDLKAQGIGIIYISHRMAEIFAHCSRVTVLRDGRNVHCGPLAELDADALVRRMVGRDLG 246
Query: 245 AHSYKWAPQEG---ADTPVLEVRNLSVPASVENTDLTLRPGEIVGISGLIGSGRTELALA 301
+ + P+ G PVLEV +++ V TLR GEI+GI+GL+G+GR+ELA
Sbjct: 247 NY---YPPKHGDAAHGEPVLEVSDIADGERVHGVSFTLRRGEILGIAGLMGAGRSELAET 303
Query: 302 LFGMRPDFTGSVRLAGREVHPRTVQEGIACGVAYVPEDRLTEGLFLTQSIERNIIVTSIE 361
+ G+R G+VRL GR + R + + G+AY+ EDR G++L I +NI ++
Sbjct: 304 VCGLRTATRGAVRLRGRTLAIRKYSDALREGIAYLSEDRKAAGVYLDLPIAQNIASMALR 363
Query: 362 KFVRGLFINRKKAD-ETTREMFSAMQIVAPGPHTPVNHLSGGNAQRVVLARWLLTGAKVL 420
+ + ++ A+ + ++ +++ + G V LSGGN Q+V +A+ L T VL
Sbjct: 364 RVSSRFGLLQRAAERKLALDLGGKLKLKSDGVDIDVASLSGGNQQKVAIAKLLATNPSVL 423
Query: 421 ILNGPTVGVDVGSKAQIHTIIRKLAEKEGLAVLMISDDVPELVQNCNRVLVMHRGRFVDE 480
+++ PT GVDVG+K++IH I+R+LA +G+ V++IS ++PE++ C+R LV+ GR E
Sbjct: 424 LMDEPTRGVDVGAKSEIHHILRELA-SQGVGVVVISSELPEIIGLCDRALVIRDGRLAGE 482
Query: 481 LSGESMTEDAV 491
+ MTE+A+
Sbjct: 483 VQDNEMTEEAL 493
Score = 83.2 bits (204), Expect = 2e-20
Identities = 62/231 (26%), Positives = 117/231 (50%), Gaps = 9/231 (3%)
Query: 24 VSLSIRPGEIHCLAGENGSGKSTVIKIMSGVYTPEDGEILIDGKPVGKLDPVKSVHHGIQ 83
VS ++R GEI +AG G+G+S + + + G+ T G + + G+ + ++ GI
Sbjct: 277 VSFTLRRGEILGIAGLMGAGRSELAETVCGLRTATRGAVRLRGRTLAIRKYSDALREGIA 336
Query: 84 VIYQDFSLFG---NLTVAENLAINTFLMEGRK--TVDWRHVRELAQKALDRLGVSID-LD 137
+ +D G +L +A+N+A + + R+LA +L + D +D
Sbjct: 337 YLSEDRKAAGVYLDLPIAQNIASMALRRVSSRFGLLQRAAERKLALDLGGKLKLKSDGVD 396
Query: 138 TDVETLPTSGKQIVAIARAVMADARLIIMDEPTTALTRHEVDALFKIVRDIQAQGIAVLF 197
DV +L +Q VAIA+ + + +++MDEPT + + I+R++ +QG+ V+
Sbjct: 397 IDVASLSGGNQQKVAIAKLLATNPSVLLMDEPTRGVDVGAKSEIHHILRELASQGVGVVV 456
Query: 198 VSHKMREMLEISERLTVFRNGKKVAEGPIAEFDEPAITRAMTG---QELTA 245
+S ++ E++ + +R V R+G+ E E E A+ R +G +E TA
Sbjct: 457 ISSELPEIIGLCDRALVIRDGRLAGEVQDNEMTEEALLRLASGLCEEEATA 507
Score = 60.5 bits (145), Expect = 1e-13
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 10/227 (4%)
Query: 256 ADTPVLEVRNLS----VPASVENTDLTLRPGEIVGISGLIGSGRTELALALFGMRPDFTG 311
A + +LE++ +S ++ D TL GEI + G G+G++ L + G+ G
Sbjct: 3 AVSALLELKGISKRFGASRALTGVDFTLHAGEIHALCGENGAGKSTLMNIIDGIHQPDEG 62
Query: 312 SVRLAGREVHPRTVQEGIACGVAYVPEDRLTEGLFLTQSIERNIIVTSIEKFVRGLFINR 371
L GR+V + G+ V ++ G ++ NI + I
Sbjct: 63 ETSLDGRKVVIDGPAHAMRLGIGLVHQEIALCG---DATVAENIFMPEINAGKHAWMNYA 119
Query: 372 KKADETTREMFSAMQIVAPGPHTPVNHLSGGNAQRVVLARWLLTGAKVLILNGPTVGVDV 431
+ R + Q V P V LS Q + +A+ L KVLIL+ PT +
Sbjct: 120 SLNERAARVLQRLGQDVDPA--ALVKDLSISTQQLIEIAKALTLDCKVLILDEPTAALTD 177
Query: 432 GSKAQIHTIIRKLAEKEGLAVLMISDDVPELVQNCNRVLVMHRGRFV 478
A + ++ L + +G+ ++ IS + E+ +C+RV V+ GR V
Sbjct: 178 NESAALFKVLHDL-KAQGIGIIYISHRMAEIFAHCSRVTVLRDGRNV 223