Pairwise Alignments

Query, 499 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 510 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  345 bits (884), Expect = 3e-99
 Identities = 190/471 (40%), Positives = 291/471 (61%), Gaps = 3/471 (0%)

Query: 5   LIELRHIGKRFGGVKALDDVSLSIRPGEIHCLAGENGSGKSTVIKIMSGVYTPEDGEILI 64
           ++E+R I + F GVKALD V +++ PG++  L GENG+GKST++KI++G+Y P +GEIL+
Sbjct: 19  VLEMRGISQIFPGVKALDGVDIALYPGKVTALIGENGAGKSTLVKILTGIYRPNEGEILL 78

Query: 65  DGKPVGKLDPVKSVHHGIQVIYQDFSLFGNLTVAENLAINTFLMEGRKTVDWRHVRELAQ 124
           DGK V       ++  G+  I+Q+  LF  L+V EN+ +          +DW+ + E A+
Sbjct: 79  DGKAVHFHSAQDAIDAGVTAIHQETVLFDELSVGENIFLGHAPKGRFGLIDWKTINERAR 138

Query: 125 KALDRLGVSIDLDTDVETLPTSGKQIVAIARAVMADARLIIMDEPTTALTRHEVDALFKI 184
             L++L  +ID    ++ L  + + +VAIARA+  +AR++IMDEPT AL+R E+D LF+I
Sbjct: 139 ILLEQLESTIDPTIRLKDLSIAQRHLVAIARALSVEARIVIMDEPTAALSRKEIDDLFRI 198

Query: 185 VRDIQAQGIAVLFVSHKMREMLEISERLTVFRNGKKVAEGPIAEFDEPAITRAMTGQELT 244
           V +++ QG A+LF+SHK  E+ EI+E   VFR+GK V  G +A   +  I R M G+++T
Sbjct: 199 VENLKRQGKAILFISHKFDEVYEIAENYAVFRDGKMVGAGTLATTPQDEIVRLMVGRDVT 258

Query: 245 AHSYKWAPQEGADTPVLEVRNLSVPASVENTDLTLRPGEIVGISGLIGSGRTELALALFG 304
               K A   G    VL VR+ S      +  L LR GEI+G+ GLIG+GR+EL  +LFG
Sbjct: 259 NAFPKQAVTLGPT--VLSVRDYSHQTEFRDISLDLRKGEILGLYGLIGAGRSELCQSLFG 316

Query: 305 MRPDFTGSVRLAGREVHPRTVQEGIACGVAYVPEDRLTEGLFLTQSIERNIIVTSIEKFV 364
           +    +G V L G+ +  R+ ++ I  G+ YVPE+R   GL L   I +N+ + S+ +  
Sbjct: 317 ITRPASGEVTLDGQPLTIRSPEDAIRAGIVYVPEERGRHGLALDMPIYQNMSLPSLTRTS 376

Query: 365 RGLFINRKKADETTREMFSAMQIVAPGPHTPVNHLSGGNAQRVVLARWLLTGAKVLILNG 424
           R  F+         R+  + + + A     PV  LSGGN Q+VV+ +WL T  KV+IL+ 
Sbjct: 377 RKGFLTAANEFALARKYAARLDLRAAALSVPVGTLSGGNQQKVVIGKWLATKPKVIILDE 436

Query: 425 PTVGVDVGSKAQIHTIIRKLAEKEGLAVLMISDDVPELVQNCNRVLVMHRG 475
           PT G+D+GSKA +H  I +LA  EGL+++MIS ++PE++   +R +VM  G
Sbjct: 437 PTKGIDIGSKAAVHGFISELA-AEGLSIIMISSELPEILGMSDRAIVMREG 486



 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 62/223 (27%), Positives = 116/223 (52%), Gaps = 5/223 (2%)

Query: 23  DVSLSIRPGEIHCLAGENGSGKSTVIKIMSGVYTPEDGEILIDGKPVGKLDPVKSVHHGI 82
           D+SL +R GEI  L G  G+G+S + + + G+  P  GE+ +DG+P+    P  ++  GI
Sbjct: 286 DISLDLRKGEILGLYGLIGAGRSELCQSLFGITRPASGEVTLDGQPLTIRSPEDAIRAGI 345

Query: 83  QVIYQDFSLFG---NLTVAENLAINTFLMEGRKT-VDWRHVRELAQKALDRLGV-SIDLD 137
             + ++    G   ++ + +N+++ +     RK  +   +   LA+K   RL + +  L 
Sbjct: 346 VYVPEERGRHGLALDMPIYQNMSLPSLTRTSRKGFLTAANEFALARKYAARLDLRAAALS 405

Query: 138 TDVETLPTSGKQIVAIARAVMADARLIIMDEPTTALTRHEVDALFKIVRDIQAQGIAVLF 197
             V TL    +Q V I + +    ++II+DEPT  +      A+   + ++ A+G++++ 
Sbjct: 406 VPVGTLSGGNQQKVVIGKWLATKPKVIILDEPTKGIDIGSKAAVHGFISELAAEGLSIIM 465

Query: 198 VSHKMREMLEISERLTVFRNGKKVAEGPIAEFDEPAITRAMTG 240
           +S ++ E+L +S+R  V R G    +   AEF    + RA TG
Sbjct: 466 ISSELPEILGMSDRAIVMREGLMAGQFERAEFSPEKLVRAATG 508