Pairwise Alignments

Query, 625 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 431 a.a., Neu5Ac permease from Alteromonas macleodii MIT1002

 Score =  214 bits (545), Expect = 6e-60
 Identities = 124/424 (29%), Positives = 228/424 (53%), Gaps = 11/424 (2%)

Query: 208 IFLGLFVAVFLVLGVPIAFCFGLGTLAYLTFTTWVP--TIVMIGRMDEGMSGIILLSVPV 265
           I L +   V L+L VPI+   G+ TL  +  +  +   TI +  RM  G++   LL++P 
Sbjct: 6   IILVVTFFVLLLLNVPISISIGVATLLAMVMSMDIAPATITIAQRMAGGLNSFALLAIPF 65

Query: 266 FVLLGCVLDATGMGKAIVELLSSMFGHIRAGMSYVLLGSLFLVSGISGSKVSDMATVAPA 325
           FVL G ++   G+ K ++E   ++ G +  G++ V + S  L   ISGS V+  + +   
Sbjct: 66  FVLSGLIMGRGGIAKRLIECAMALIGALPGGLALVNVVSCMLFGAISGSAVATTSAIGSF 125

Query: 326 LFPEMKRRGHKPKEMIALLATGAAMADTVPPSIVLIVLGSAAG-VSIAGLFTSGF----M 380
           + PEMK+ G++P    A+ A  +     +PPS +LIV   A+G VSIA LF +G+    M
Sbjct: 126 MLPEMKKAGYEPNFSAAVTAAASTTGMLIPPSNILIVYAIASGGVSIAALFMAGYIPGIM 185

Query: 381 IAMVLLLVLAVLARWKARDENMEGAKRTPWPQVGKAALIAAPALVLPFLIRSLVGGGVAT 440
           + + L+LV  + A+ K    +     R P   V +  + A P+L L FL+   + GGV T
Sbjct: 186 VGLALMLVCFIYAKMKGYPLS----PRLPIKVVVEKTIAALPSLFLIFLVIGGIVGGVFT 241

Query: 441 ATEVSTIAVLYAMIVGAVLYGGISLRKLYSMLVETAALSGAILLILGCASAMAWGLTQSG 500
           ATE   IAV+Y++++  V Y  +  + L  + ++ A  +  ++L++  ++AM+W L+   
Sbjct: 242 ATEAGAIAVVYSLLLAVVFYKEVDAKALPDIFLKAAETTAIVMLLIAASTAMSWLLSFEN 301

Query: 501 FAFQLTAMITDLPGGWMTYMVVSILIFMILGCVLEGLPAIVLLAPIMFPIARTLGINDIH 560
               L+  +  +    +  +++  L+ +++G  L+  PA+++  PI  P+A  LG++++ 
Sbjct: 302 IPQTLSNALLSISDNPLLILLLINLLLIVVGAFLDMTPAVLIFTPIFLPVALELGMSELQ 361

Query: 561 YSMVVVVAMNIGLMAPPIGIGFYIACKIGNVSPDEAMGAIWPYLAAMIIGLLLIAAIPGF 620
           + +++V+ ++IGL +PP+G   +I C I     +  +  + P   AM + L+L+  +  F
Sbjct: 362 FGIMLVLNLSIGLCSPPVGAVLFITCAIAKTKLENIIRPLIPLYVAMFVVLMLVTYVAWF 421

Query: 621 STIL 624
           S  L
Sbjct: 422 SEAL 425