Pairwise Alignments

Query, 342 a.a., ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 50.4 bits (119), Expect = 6e-11
 Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 37/289 (12%)

Query: 13  ALWAFGTAGAQADGRLNILC---AADDAWCAAMQRAYETKTGVQTIMVRKSTGEILEQVR 69
           AL A G + AQA  ++ ++    A   A   A+ + +  + G Q I    +     E  R
Sbjct: 13  ALLALGLSNAQAAQQMVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQSEYNG----EMAR 68

Query: 70  KEKDAPTVDVWWAGT---GDTHLQAASEGLLEAYASK---NETEVLPWAQNFFTMSGGQS 123
            +  A T +V W      G   ++   EG+ E    +   +  E++P A        G +
Sbjct: 69  IQVMADTGNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAA----AQDCGSA 124

Query: 124 AGIYAGALGFAYNSDLLQRQGLPVPSCWKDLIS-ETYRGKILAGNPNSSGTAFTMLATLV 182
           A +++ A+  AY+   L +     P+ W D    + Y GK            F +LA  V
Sbjct: 125 ALVWSVAI--AYDRSKLAQ----APASWADFWDVDKYPGKRGLRKRAVYNLEFALLADGV 178

Query: 183 QL----------FGEEEAFSYMKALDQNVAEYTKAGSAPVKAAARGEAVIGISFMHDAVT 232
           ++           G E AF+ +  L  ++ ++  AG+ P +  A G+ V+  ++      
Sbjct: 179 KVEDVYRVLSTPAGVERAFAKLSELKPHI-QWWDAGAQPAQWLAAGDVVMTSTYSGRIAV 237

Query: 233 QKEAGAPLVIVAPCEGTGYEIGAVSIVRGTKNREEARRFVDFALSPDGQ 281
             + G+PL +V P  G+ Y +   +I++G+++ ++A+R + +A  PD Q
Sbjct: 238 AAQQGSPLAVVWP--GSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQ 284