Pairwise Alignments

Query, 342 a.a., ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 42/308 (13%)

Query: 12  LALWAFGTAGAQADGRLNILCAADDAWCAAMQRAYET--KTGVQTIMVRKSTGEILEQVR 69
           LAL  F TAG      L ++        A ++  YE   K G   I+  +  GE + +V+
Sbjct: 10  LALGLF-TAGQAMAADLTVISFGGANKAAQVKAFYEPWEKAGNGKIVAGEYNGE-MAKVK 67

Query: 70  KEKDAPTVDVWWAGTGDTHL-QAASEGLLEAYASK---NETEVLPWAQNFFTMSGGQSAG 125
              D  +V           L +   EG+ E        NE + +P A            G
Sbjct: 68  AMVDTKSVSWNLVEVESPELARGCDEGMFEELDPALFGNEADYVPGAIQ------PCGVG 121

Query: 126 IYAGALGFAYNSDLLQRQGLPVPSCWKDLI-SETYRGKILAGNPNSSGTAFTMLA----- 179
            +  +   AYN+D L+      P+ W D   ++ + GK            F ++A     
Sbjct: 122 FFVWSTVMAYNADKLKT----APTSWADFWDTKQFPGKRGLRKGAKYTMEFALMADGVAP 177

Query: 180 -----TLVQLFGEEEAFSYMKALDQNVAEYTKAGSAPVKAAARGEAVIGISFM-HDAVTQ 233
                 L    G++ AF  +  L  ++ ++ +AG+ P +  A G+ V+  ++    A  Q
Sbjct: 178 KDVYKVLATKEGQDRAFKKLDELKPSI-QWWEAGAQPPQFLASGDVVMSSAYNGRIAAVQ 236

Query: 234 KEAGAPLVIVAPCEGTGYEIGAVSIVRGTKNREEARRFVDFALSPDGQ---ATGAAAGQN 290
           KE+   +V      G  Y+  A +I +G KN EEA++F+ +++ P+ Q   +   A G  
Sbjct: 237 KESNLKVV----WNGGIYDFDAWAIPKGAKNVEEAKKFIAYSVKPEQQKIYSENIAYG-- 290

Query: 291 QVPSNAKA 298
             P+N+KA
Sbjct: 291 --PANSKA 296