Pairwise Alignments

Query, 526 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 1022 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  119 bits (297), Expect = 7e-31
 Identities = 109/383 (28%), Positives = 175/383 (45%), Gaps = 68/383 (17%)

Query: 192  SNEAGKEMLGYDSSIR-------------GTLQQSVVSASSKFVDVLQAIMDNRRVFEDK 238
            +N + K++L Y    R             GT   +V  A S F    ++I ++  + +D 
Sbjct: 643  ANPSAKQLLDYHEDDRDIEGHPLESLMKVGTPAGAVTFAGSPFQ---RSITEDLAIHDDD 699

Query: 239  VVVRTDSGEDKLVLLSISFPAEAASFNRVVVSMVDVTQREMELKALAEAQAELTKASKAA 298
             V  + SG+   V  + S   E A    V++S  ++       +AL  AQ E  +AS+ A
Sbjct: 700  AVFISASGKSVAVAYACSPHGEDADKRSVIISFRNI-------EALKRAQREALQASRLA 752

Query: 299  AVGAMSASLSHELNQPLGAI-------------IVNAQTLLRWLDRDP---PDLAAARRS 342
            +VG ++A ++HE+N P+  +             +++A T  R L  +    P LA A   
Sbjct: 753  SVGQLAAGIAHEINTPIQYVGDNLRFISDSLIKLMSALTAARELGSEVGQIPALAEAAAK 812

Query: 343  AERMIRD--------------GERASDIIQNTRSLLAH-------TSGKVETFDLDEFID 381
             E   R                E    + Q  R +L+        TS K+ T D++  +D
Sbjct: 813  FEAAFRTTKIPFLVAEIPAALSESLDGVAQIARIVLSMKEFSHPGTSSKIMT-DINRALD 871

Query: 382  ETLSLLEHELERSGTTVHVENEATPPITAVRIELQQVLINLLTNAIQAMDEAG--ISNRT 439
             TL++  +  + S       +   PP+     EL QV +NL+ NA  A++ +G  +  R 
Sbjct: 872  STLTVSRNVWKHSAEVERNFDPTLPPVLCHAGELNQVFLNLIVNAAHAIESSGKPLPGR- 930

Query: 440  ITVRKEREDGDNIQIAVEDSGPGFPAQMKDKLFSPFFTTKET--GMGMGLSICR-TTLEA 496
            IT+   R DG ++ I V DSG G P  +++++F PFFTTKE   G G GL+ICR   +  
Sbjct: 931  ITISTGR-DGGHVVITVADSGTGVPEAIRERIFDPFFTTKEVGKGTGQGLAICRDVVMTK 989

Query: 497  RGGRLTGDNHPLGGAVFTISMPI 519
             GG L   ++   GAVF + +PI
Sbjct: 990  HGGSLDLGDNAGDGAVFVVRLPI 1012