Pairwise Alignments

Query, 283 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 83/263 (31%), Positives = 118/263 (44%), Gaps = 17/263 (6%)

Query: 3   MTKLAGLSALALIIGVTSASALTLEEVKKQGYIRAATANEVPYSYMQPDGTSAGIGPDVA 62
           M KLA L ALAL   V S  +   E+  K G I AA     P+++ QPDG+ AG   D+ 
Sbjct: 1   MKKLALLGALAL--SVFSLVSQAAEKPLKIG-IEAAYP---PFAFKQPDGSIAGFDYDIG 54

Query: 63  NAVLKSMGIEEVNWTVTPFGTLIPGLKARRFDFAAAEQNISPERCKQVAFTEPNSSYGEG 122
           NA+ + M  +   W    F  LIP LK R+ D   +  +I+ +R K V FT+        
Sbjct: 55  NALCEEMKTK-CTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPAR 113

Query: 123 LLVKKGNPKKLTTYADIAKD-PALKVAVVSGANNVDFLRAV-GVKEEQIV-FIPANADAI 179
           L++K G     TT +D   +    K+ V  G+ +  F + V G K   +V +   N   +
Sbjct: 114 LVMKDG-----TTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYL 168

Query: 180 PTVQSRADAYAATELTVSELAKGQANVEQVKPFVDPVVKDAPVRNYG-GFAFRPEDKELR 238
                R D   A + T+ E    + +  +   FV P   DA     G G A R  DK   
Sbjct: 169 DVAAGRLDGTVA-DATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANV 227

Query: 239 DAFNTALVEFRKTDDYKKILAKY 261
           D  N A+   R    YK+I +KY
Sbjct: 228 DRINAAIDAIRANGKYKEIESKY 250