Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  125 bits (315), Expect = 5e-34
 Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 8   PMLWQGAVVTMTITLAALVVGTVLAFFFGILRVEGGPI-LSTVALCYTEVFRGTSLLVQL 66
           P L +GA+VT+ IT  AL +G VL    GI R+      +      Y    RGT LLVQL
Sbjct: 13  PDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAAIRGTPLLVQL 72

Query: 67  FWFYYALPLIGLSFDPVTTGVMVLAAHAGGYGAEIVRGALSSVSVQQLEAARALNFTRMQ 126
           F  ++ LP  G+       GV+ L  ++G Y +EIVRGA+ S+   Q  AA++L  T   
Sbjct: 73  FILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQSLGMTPGV 132

Query: 127 TLFRISLPQAVVEMMPAFGNLAIETLKLSSLVSLISIADLTFAAQSIRNLTLDSTSIYSI 186
            + +I LPQAVV M+P  GN  I  +K S+LVSL++I D+    Q I +++  S  +Y  
Sbjct: 133 AMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRSLEVYLA 192

Query: 187 TLLCYFAMSLILMVIIRVIEHVVRRGNV 214
             + YF ++  + +I+R  E  +R+G +
Sbjct: 193 IAVVYFVLTGTMTLILRHFEQKLRQGGL 220