Pairwise Alignments

Query, 331 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 342 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  144 bits (364), Expect = 2e-39
 Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 9/316 (2%)

Query: 18  GPVIALIAVMLIFGTFADNFLSLATFGSVAFQLPELGLLTLAMLLPLLTGGINLSVTFAA 77
           G +I +I +++ F +   NF S     ++  ++   G++ + M   +LT GI+LSV    
Sbjct: 28  GVLIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMAVGMTFVILTAGIDLSVGSIL 87

Query: 78  NLSGLAAAWVLQAHGGVDAPPSAF-----LFACLAALVTGGAAGAMTGAAIAYTRAHPIL 132
            +  + AA+V++        P+A+     L      L  G A G + G  +   R  P +
Sbjct: 88  AVCAMTAAYVIKGDNFTTVDPNAWGGMSWLIGLGICLAMGTAIGFLHGLGVTRLRLPPFI 147

Query: 133 VTLSMMIFLRGLGEFLTRGGDVSGFPAYMAPLGHGTLLGLPIPLLIFIVCVGIWHVLLTR 192
           VTL  M   RGL   +  G  ++GF       G G LLG+ IP+ IF +     ++ L +
Sbjct: 148 VTLGGMTIWRGLTLVINDGAPIAGFDPGYRWWGRGELLGISIPIWIFAIVAVGGYLALHK 207

Query: 193 TKLGFGLLMIGSNIEAARYSGLNTRKIQVLVYTLSGLMCAVAGIIMLARFNSVRVGHGES 252
           T+ G  +  IG N EAAR +G+N +++ V VY L G +  +AG I+ AR  S     G S
Sbjct: 208 TRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLGSAEAVAGIS 267

Query: 253 YLLITVLAAFLGGINPFGGFGRVLPVFVALIVLQLLSSGLNLLGANQHLATALWGVLMIV 312
           + L  + +  +GG +  GG+GR+    +  I++ +L +GL L+  + +    + G+++++
Sbjct: 268 FELRVIASVVIGGTSLMGGYGRIGGTIIGSIIMGILINGLVLMNVSAYYQQIITGLIIVL 327

Query: 313 VMAARGLFSSYFASLR 328
            +A    F +Y  S R
Sbjct: 328 AVA----FDTYAKSRR 339