Pairwise Alignments

Query, 331 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  165 bits (418), Expect = 1e-45
 Identities = 103/307 (33%), Positives = 167/307 (54%), Gaps = 6/307 (1%)

Query: 8   FNAIFGADMAGPVIALIAVMLIFGTFADNFLSLATFGSVAFQLPELGLLTLAMLLPLLTG 67
           F+A+  + +A P+  LI V ++ G  +DNF S+    +V  Q+  +G+L + M   +LTG
Sbjct: 18  FSAMLRSPLALPLAGLIVVSILMGLASDNFFSVNNIMNVLRQVSVVGILAVGMTFVILTG 77

Query: 68  GINLSVTFAANLSGLAAAWVLQAHGGVDAPPSAFLFACLAALVTGGAAGAMTGAAIAYTR 127
           GI+LSV     L G  +A ++   G   A       A  A L  G   G   GA +A+ R
Sbjct: 78  GIDLSVGAVMALVGTLSAGLMVNTGLSPA------IALPAGLFIGLGIGIFNGALVAWGR 131

Query: 128 AHPILVTLSMMIFLRGLGEFLTRGGDVSGFPAYMAPLGHGTLLGLPIPLLIFIVCVGIWH 187
              I+VTL+ M   RGLG   + G  VSG P++++  G G +  +P+P++I +V   +  
Sbjct: 132 MPAIIVTLATMGMARGLGLIYSGGYPVSGIPSWISWFGVGRVGIVPVPVIIMVVIYAVAW 191

Query: 188 VLLTRTKLGFGLLMIGSNIEAARYSGLNTRKIQVLVYTLSGLMCAVAGIIMLARFNSVRV 247
           VLL RT  G  +  +G N  AAR SG+ TR++++ VY +SG+  A A +I+  R  S + 
Sbjct: 192 VLLQRTAFGRHVYALGGNELAARLSGVKTRRVKLAVYGISGVTAAFAALILTGRLMSGQP 251

Query: 248 GHGESYLLITVLAAFLGGINPFGGFGRVLPVFVALIVLQLLSSGLNLLGANQHLATALWG 307
             G  + L  + A  LGG    GG G +L   +  ++L +L++GLNL+G N +L   + G
Sbjct: 252 NAGVGFELDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLMGINPYLQDVIKG 311

Query: 308 VLMIVVM 314
            ++++ +
Sbjct: 312 GIILLAI 318