Pairwise Alignments

Query, 338 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 322 a.a., ribose ABC transporter permease from Dickeya dianthicola ME23

 Score =  156 bits (395), Expect = 6e-43
 Identities = 93/311 (29%), Positives = 166/311 (53%), Gaps = 15/311 (4%)

Query: 15  LVVMVLLCTGLSFATDRFLTISNAFDVLNVSAVNIIFAVGLLVVLISGGIDIS----FAV 70
           L+ +++L   +S  +  F T++N F++L  ++VN I AVG+ +V+++ GID+S     A+
Sbjct: 23  LIALLILIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLAL 82

Query: 71  AASVVQYVTVLALNALGGGNWAEGFIIAGAVGLSLGFVNAFLVWRLNIISIVATISTFNI 130
             +V   +  L +NAL           A A+G  +G     ++ +  + + +AT+    +
Sbjct: 83  TGAVAASIIGLEINAL------VAVFAALALGAVIGAGTGIVIAKGRVQAFIATLVMMLL 136

Query: 131 FFGLLMFFTKGVSIYDLPEWLSTRVVFYEREMPDGSWVELTLPVVVMILCCVATWFMISR 190
             G+ M +T G  I       +  + ++    P G    +  P+ +M +  +ATW+M+  
Sbjct: 137 LRGVTMVYTSGSPINTGFSDAADALGWFGIGRPLG----IPTPIWIMAVVFLATWYMLHH 192

Query: 191 TTVGRKLYAFGDNPEGARRFGINIGAMHYISFGWLGLMAGIAGLMQAHYAQEVVPNALYG 250
           T +GR +YA G N    R  GI++  +  + +   GL++ +AG+++        P A  G
Sbjct: 193 TRIGRYIYALGGNEAATRLSGISVDRVKVVVYSLCGLLSALAGIIEVARLSSAQPTAGTG 252

Query: 251 RELDVLAATVLGGARLGGGKGSVIGCVLGVLMVSITQNGLNLMGVSPFAFKMIVGAIILV 310
            ELD +AA VLGG  L GGKG V+G ++G L++    NGLNL+GVS + ++MIV A++++
Sbjct: 253 YELDAIAAVVLGGTSLSGGKGRVVGTLIGALILGFLNNGLNLLGVSSY-YQMIVKAVVIL 311

Query: 311 AITLSSTRFDK 321
              L   +  K
Sbjct: 312 LAVLVDNKGSK 322