Pairwise Alignments
Query, 496 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58
Subject, 506 a.a., fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113
Score = 308 bits (790), Expect = 2e-88
Identities = 178/495 (35%), Positives = 284/495 (57%), Gaps = 11/495 (2%)
Query: 2 SAEPLLSLKNVKVTFGGVRALKGVSFEVNPGEVHCLAGENGCGKSTVIKVITGVYKPESD 61
S E LL + + +F GV+AL V+ +V P +H L GENG GKST++K + G+Y+ +S
Sbjct: 9 SGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSG 68
Query: 62 AELYFDGKPIAAMTPTLAQSLGIQVIWQDLALFDEMTVAENIGF-QYAVNGRFGLVDKRA 120
L F GK I + A GI ++ Q+L L + +V +N+ +Y G F VD+
Sbjct: 69 TIL-FQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMF--VDQDK 125
Query: 121 IKNAAEKALARLGVSFDLDRPLKELPIAQRQIVAIARALVGEARLVFMDEPTASLTQSET 180
+ + L + D + L ++Q Q++ IA+A A++V MDEPT+SLT+ E
Sbjct: 126 MYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEV 185
Query: 181 DYLIDIVRNLSASGVAVVFVSHRLAEVLEISDRITVLRDGSLVGVFPVEGMTQSRVTELM 240
++L I+R L G +V++SH++ E+ ++ D +TVLRDG + P+ G+T ++ +M
Sbjct: 186 NHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIAMM 245
Query: 241 TGRNFDSAVIAADHDDKP--VVLSVRGLT--RAGEFEDVSFDLRRGETLGITGLLGAGRT 296
GR+ + D ++KP V+L VR LT R DVSFDL +GE LGI GL+GA RT
Sbjct: 246 VGRSLNQRF--PDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRT 303
Query: 297 ELALTLFGMHRPQSGEVLIDGKKVDFHSNRDAIRVGVAYLSEDRLSLGLNQPQSIADNLV 356
++ TLFG+ +G + + GK+++ H+ +AI G A ++E+R S G+ I N +
Sbjct: 304 DIVETLFGIREKSAGTITLHGKQINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSL 363
Query: 357 MASLDKLLSG-GLISTSKKADVVSRWISALGVKIGLPEDPIRTLSGGNQQRVAIAKWLAI 415
++++ + GL+ S+ I ++ VK I +LSGGNQQ+V I +WL
Sbjct: 364 ISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLT 423
Query: 416 GPKILILDAPTVGVDVGARAGIFEIVRKLAAEGLSIIVISDEAPEVYFNTDRVIHMVEGR 475
P+IL+LD PT G+DVGA+ I++++ +LA +G II+IS E PE+ TDR++ M G
Sbjct: 424 QPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMSNGL 483
Query: 476 FHATYDPRRLSLTEL 490
D + + E+
Sbjct: 484 VSGIVDTKTTTQNEI 498
Score = 88.6 bits (218), Expect = 5e-22
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 273 EDVSFDLRRGETLGITGLLGAGRTELALTLFGMHRPQSGEVLIDGKKVDFHSNRDAIRVG 332
++V+ +R + G GAG++ L LFG+++ SG +L GK++DFHS ++A+ G
Sbjct: 30 DNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENG 89
Query: 333 VAYLSEDRLSLGLNQPQSIADNLVMASLDKLLSGGLISTSKKADVVSRWISALGVKIGLP 392
++ + ++ L L +S+ DN+ + G + K L + I P
Sbjct: 90 ISMVHQE---LNLVLQRSVMDNMWLGRYPT--KGMFVDQDKMYRETKAIFDELDIDID-P 143
Query: 393 EDPIRTLSGGNQQRVAIAKWLAIGPKILILDAPTVGVDVGARAGIFEIVRKLAAEGLSII 452
+ TLS Q + IAK + KI+I+D PT + +F I+RKL G I+
Sbjct: 144 RARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIV 203
Query: 453 VISDEAPEVYFNTDRVIHMVEGRFHATYDPRRLSLTELEA 492
IS + E++ D V + +G++ AT L++ ++ A
Sbjct: 204 YISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIA 243
Score = 67.0 bits (162), Expect = 1e-15
Identities = 49/226 (21%), Positives = 107/226 (47%), Gaps = 9/226 (3%)
Query: 21 ALKGVSFEVNPGEVHCLAGENGCGKSTVIKVITGVYKPESDAELYFDGKPIAAMTPTLAQ 80
+++ VSF+++ GE+ +AG G ++ +++ + G+ + +S + GK I A
Sbjct: 278 SIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGI-REKSAGTITLHGKQINNHNANEAI 336
Query: 81 SLGIQVIWQDLALFDEMTVAENIGFQYAVNG------RFGLVDKRAIKNAAEKALARLGV 134
+ G ++ ++ + IGF ++ + GL+D +K+ + + + V
Sbjct: 337 NHGFALVTEERRSTGIYAYLD-IGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRV 395
Query: 135 SFDLDRP-LKELPIAQRQIVAIARALVGEARLVFMDEPTASLTQSETDYLIDIVRNLSAS 193
R + L +Q V I R L+ + ++ +DEPT + + ++ L+
Sbjct: 396 KTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKK 455
Query: 194 GVAVVFVSHRLAEVLEISDRITVLRDGSLVGVFPVEGMTQSRVTEL 239
G ++ +S + E+L I+DRI V+ +G + G+ + TQ+ + L
Sbjct: 456 GKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRL 501