Pairwise Alignments

Query, 359 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 330 a.a., DNA-binding transcriptional repressor of ribose metabolism (NCBI) from Escherichia coli BW25113

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 83/339 (24%), Positives = 147/339 (43%), Gaps = 29/339 (8%)

Query: 9   ATIYDLSILSGASASTVSAVLNGSWRKRRISEETADKILSLAKAQRYTTNLQARGLRSSK 68
           AT+ D++ L+G S STVS V+N   + R +SE    K+ +  K   Y  +  AR L+ ++
Sbjct: 2   ATMKDVARLAGVSTSTVSHVIN---KDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQ 58

Query: 69  SGLVGLLVPVYDNRFFSSMAQTFEGQARKRGLSPMVVSGRRDPEEERRTVETLIAYSIDA 128
           +  +G+L+    N F+S + +  E    +RG S ++ +   D +   R +ETL+   +D 
Sbjct: 59  THTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDG 118

Query: 129 LFIAGVTDPDGVHQVCAR-AALPHVNID-LPGKFASSVISNNR-HGAEILTAAIL--AHA 183
           L +          ++  R   +P V +D  P    S +I +N   G ++ T  ++   H 
Sbjct: 119 LLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHT 178

Query: 184 AKGGSLGPDDVILFGGHDDHASRERIDGFHAAKADYFGVEGGDDIEITGYSPHMTEMAFE 243
                 GP         D   +R R++G+ AA     G+   D  E+TG      +  F 
Sbjct: 179 RIACITGP--------LDKTPARLRLEGYRAA-MKRAGLNIPDGYEVTG------DFEFN 223

Query: 244 RFFGRRGRL------PRCFFVNSSINFEGLLRFMGRHDGEAFGDIVVGCFDYDPFASFLP 297
             F    +L      P+  F  +     G+ + + + + +   DI V  +D    ASF+ 
Sbjct: 224 GGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMT 283

Query: 298 FPVYMIKPDIAQMLEKGFELLEENRTEPEVTIIEPQLIP 336
            P+  I     ++ E   ++L    T+P +     QL P
Sbjct: 284 PPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTP 322