Pairwise Alignments

Query, 812 a.a., fimbrial usher protein from Agrobacterium fabrum C58

Subject, 850 a.a., Outer membrane usher protein FimD/PapC from Escherichia coli ECRC62

 Score =  103 bits (257), Expect = 4e-26
 Identities = 186/850 (21%), Positives = 328/850 (38%), Gaps = 131/850 (15%)

Query: 22  FFSGSFSMAQDIPPAAAAPSFAAGEA---GQLQLEVYIND---VSTDLIATFRQNDAGSL 75
           +F+  F ++ D+  +    +F  G     G  ++++Y+ND    S D+      N+A  +
Sbjct: 10  YFNPRF-LSNDLAESVDLSAFTKGREAPPGTYRVDIYLNDEFMTSRDITFIADDNNADLI 68

Query: 76  -LIEPDQLKNIGISPVESAV------SADGWIDVS--------RLPEVTARYDESIQSVH 120
             +  D L ++GI   +SA+      SA+  +  +        RL + +  +D   Q + 
Sbjct: 69  PCLSTDLLVSLGIK--KSALLDNKEHSAEKHVPDNSACTPLQDRLADASTEFDVGQQHLS 126

Query: 121 FTLPMAARANKVIDASGKSTHEENKETEEKATSNFGGLVNYTIYGSSGGGTWSDIADFNG 180
            ++P                 EE             GL+NY+  G+S     +  A  + 
Sbjct: 127 LSVPQIYVGRMARGYVSPELWEEGINA---------GLLNYSFNGNSINNRSNHNAGKSN 177

Query: 181 VSALLESRVFGPLGVLSSSQVLSTSRLSEFDTQRLDTTWSYSNEET----------LTTY 230
            + L           L S   + + RL +      ++TWSY++  +          + T 
Sbjct: 178 YAYLN----------LQSGINIGSWRLRD------NSTWSYNSGSSNSSNSNKWQHINTS 221

Query: 231 RAGDLI------TGGLSWTR-----PTRFGGLQIRRNFDLRPDIVTMPMPEFSGSAAVPS 279
              D+I      T G S+T         F GL+I     + PD      P   G A   +
Sbjct: 222 AERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQHGFAPVIHGIARGTA 281

Query: 280 TVDVYVNNIRRLSQDVPEGPFSITNLPVISGAGNARLVVRDALGREIVSETPFYTSPDLL 339
            V V  N        VP GPF+I ++   +  G+ ++ +++A G       P+ + P L 
Sbjct: 282 QVSVKQNGYDVYQTTVPPGPFTIDDINSAANGGDLQVTIKEADGSIQTLYVPYSSVPVLQ 341

Query: 340 AQGLVDFSAELGFARRNYGTSSFDYDDRLLGSATVRYGVSDGFTVEGHAEGGEDF--YNV 397
             G   ++  +G  R      S           ++ +G+   +T  G  +  ED+  +N+
Sbjct: 342 RAGYTRYALAMGEYRSGNNLQS----SPKFIQGSLMHGLEGNWTPYGGMQIAEDYQAFNL 397

Query: 398 GLG---GVF-----------TLGAHGLAALSGASSRFGDESGYQLSASVEAELLGVRLNA 443
           G+G   G+F           T  A G      +      +S YQ   +++  + G R   
Sbjct: 398 GIGKDLGLFGAFSFDITQANTTLADGTRHSGQSVKSVYSKSFYQTGTNIQ--VAGYRY-- 453

Query: 444 RSQRAFGDYNDMASVSANTSKIQPISGLLSVRPP-----------RALDQISVSTQLGFD 492
            S + F + +D A    +   ++P +G  + +             R  +QIS+S QLG  
Sbjct: 454 -STQGFYNLSDSAYSRMSGYTVKPPTGDTNEQTQFIDYFNLFYSKRGQEQISISQQLGNY 512

Query: 493 ETSLNFSYTQLETFDERRSRLLGLSATRPFGENGDIFVTAYKD--LEDSNSYGIFAGLSW 550
            T+   +  Q      R  + +      PFG+       +Y +   ++   + +   L+ 
Sbjct: 513 GTTFFSASRQSYWNTSRSDQQISFGLNVPFGDITTSLNYSYSNNIWQNDRDHLLAFTLNV 572

Query: 551 SFGGGV---SGSAGMSSNADGYSLTAEVVKSEEQAEGSYGWRLR-----------GALGG 596
            F   +   S SA  +SNA  YS++ ++        G YG  L               GG
Sbjct: 573 PFSHWMRTDSQSAFRNSNAS-YSMSNDLKGGMTNLSGVYGTLLPDNNLNYSVQVGNTHGG 631

Query: 597 NDIASASG----SYRGTAARVSAGIDQFNRTTQAYAQIEGSIAVAGGDVFIGNRIDDAFA 652
           N  +  SG    +YRG     + G  +   ++Q Y  + G I      +  G  + D   
Sbjct: 632 NTSSGTSGYSSLNYRGAYGNTNVGYSRNGDSSQIYYGMSGGIIAHADGITFGQPLGDTMV 691

Query: 653 VVDAGAPGVD-ILLENRPIGQTNRRGKILLPNLRSYDVNNITLDPSNLPVDARIDHTKQT 711
           +V A  PG D + +EN+    T+ RG  +LP    Y  N + L+ ++L  +  +D T  T
Sbjct: 692 LVKA--PGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETVVT 749

Query: 712 VRPTERAGAVVNFKVETEGQVALVTLKAESGDFIETGSTGTIDGKREFIVGYDGQAYLDN 771
           V PT  A A   F  +  G+V L+TLK  +            + K   IV  +GQ YL  
Sbjct: 750 VIPTHGAIARATFNAQIGGKV-LMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLTG 808

Query: 772 IGATHRLHIT 781
           +  + +L ++
Sbjct: 809 LPQSGKLQVS 818