Pairwise Alignments
Query, 533 a.a., ABC transporter permease from Agrobacterium fabrum C58
Subject, 528 a.a., putative ATP-binding component of a transport system from Pseudomonas putida KT2440
Score = 177 bits (449), Expect = 9e-49
Identities = 155/533 (29%), Positives = 246/533 (46%), Gaps = 66/533 (12%)
Query: 20 LFSDINLRFGL-ERVGLVGRNGVGKTTLLKLITGELLPSTGTVSL--SGRIGVLRQSVQV 76
LF +++++F R GL+G NG GK+T +K++ G+L PS G V L + R+G LRQ
Sbjct: 16 LFENVSVKFNNGNRYGLIGANGCGKSTFMKILGGDLEPSAGQVMLEPNTRLGKLRQDQFA 75
Query: 77 GDDETIADLFEARHALHVLSRAQA-------------GMATLE---ELGDVD-WMLEERI 119
++ T+ D H +A+ GMA E E ++D + E R
Sbjct: 76 YEEFTVIDTVIMGHGQLWKVKAERDRIYSLPEMTEEDGMAVAELETEFAEMDGYTAESRA 135
Query: 120 AEALAVVGLDTSP-LTPLSALSGGQRTRAALAAQIHAVPDFLILDEPTNNLDRDSRMFLV 178
E L +G+ P+S ++ G + R LA + + PD L+LDEPTN+LD ++ +L
Sbjct: 136 GELLLGLGIPLEQHFGPMSEVAPGWKLRVLLAQALFSDPDVLLLDEPTNHLDINTIRWLE 195
Query: 179 DFLAVWRGGAIVVSHDRELLETLDAIVEMNTLGAMR-YGGKWSHYRAQKVLELAAAEQDI 237
L I++SHDR L ++ + G +R + G + Y + AA Q
Sbjct: 196 TILTARNSTMIIISHDRHFLNSVCTHMADLDYGELRLFPGNYDEY-------MTAATQ-- 246
Query: 238 ASAEKRLSEVRKKSQEALERKARRDAKGAAKAAKGDMPRIAAGGMKRRAEKTSGDNANLA 297
S E+ LS+ KK + E + ++ +A A+K A + + ++ ++
Sbjct: 247 -SREQLLSDNAKKKAQIAELQTFV-SRFSANASKAKQATSRAKQIDKIQLAEVKPSSRVS 304
Query: 298 SRLKTEAADDLRTARERIEILQDVTVTLPPSGLHATKTVLSLQGLTAGYFPENPVLKDLS 357
++ E A L +E + A F + + K+
Sbjct: 305 PFIRFEQAKKLHRQAVVVEKM-------------------------AKAFDDKVLFKNFD 339
Query: 358 FEITGPQRVAVTGPNGSGKTTLLSVITGDLEPFAGSVYLGVS---GAFLDQQVSLLDATL 414
+ +RVA+ GPNG GKTTLL + G++ P AGSV S G + + +
Sbjct: 340 ITVEAGERVAIIGPNGIGKTTLLRTLVGEMTPDAGSVKWTDSAEVGYYAQDHAHDFEDDM 399
Query: 415 SIRDNFLRLNPQSGENACRAALARFMFRADAALRIVGTLSGGQMLRAGLACVLGGPQPPQ 474
++ D + SGE R L R +F D L+ V +SGG+ R ++ Q P
Sbjct: 400 TLFDWMGQWT--SGEQVIRGTLGRMLFSNDEILKSVKVISGGEQGRMLFGKLI--LQKPN 455
Query: 475 LLILDEPTNHLDIDSITAVEAGLRAYDGALLVVSHDEAFLSGIGIDRRLELGA 527
+L++DEPTNHLD++SI A+ L Y G LL VSHD F+S + R +EL A
Sbjct: 456 VLVMDEPTNHLDMESIEALNLALENYPGTLLFVSHDREFVSSLA-TRIIELSA 507
Score = 81.6 bits (200), Expect = 6e-20
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 27/219 (12%)
Query: 16 DGHLLFS--DINLRFGLERVGLVGRNGVGKTTLLKLITGELLPSTGTVSLSGRIGVLRQS 73
D +LF DI + G ERV ++G NG+GKTTLL+ + GE+ P G+V + S
Sbjct: 330 DDKVLFKNFDITVEAG-ERVAIIGPNGIGKTTLLRTLVGEMTPDAGSVKWT-------DS 381
Query: 74 VQVGDDETIADLFEARHALHVLSRAQAGMATLEELGDVDWMLEERIAEALA--VVGLDTS 131
+VG + A+ H + M + +G W E++ ++ +
Sbjct: 382 AEVG--------YYAQDHAHDF---EDDMTLFDWMGQ--WTSGEQVIRGTLGRMLFSNDE 428
Query: 132 PLTPLSALSGGQRTRAALAAQIHAVPDFLILDEPTNNLDRDSRMFLVDFLAVWRGGAIVV 191
L + +SGG++ R I P+ L++DEPTN+LD +S L L + G + V
Sbjct: 429 ILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIEALNLALENYPGTLLFV 488
Query: 192 SHDRELLETL-DAIVEMNTLGAMRYGGKWSHY-RAQKVL 228
SHDRE + +L I+E++ G + + G + Y R+Q VL
Sbjct: 489 SHDREFVSSLATRIIELSADGVVDFSGTYDDYLRSQGVL 527
Score = 71.2 bits (173), Expect = 9e-17
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 41/210 (19%)
Query: 347 FPENPVLKDLSFEITGPQRVAVTGPNGSGKTTLLSVITGDLEPFAGSVYLGVS------- 399
F P+ +++S + R + G NG GK+T + ++ GDLEP AG V L +
Sbjct: 11 FGSKPLFENVSVKFNNGNRYGLIGANGCGKSTFMKILGGDLEPSAGQVMLEPNTRLGKLR 70
Query: 400 -GAFLDQQVSLLDATL----------SIRDNFLRLNPQSGENACRAALARFMF------- 441
F ++ +++D + + RD L + E+ A F
Sbjct: 71 QDQFAYEEFTVIDTVIMGHGQLWKVKAERDRIYSLPEMTEEDGMAVAELETEFAEMDGYT 130
Query: 442 ---RADAALRIVG-----------TLSGGQMLRAGLACVLGGPQPPQLLILDEPTNHLDI 487
RA L +G ++ G LR LA L P +L+LDEPTNHLDI
Sbjct: 131 AESRAGELLLGLGIPLEQHFGPMSEVAPGWKLRVLLAQALF--SDPDVLLLDEPTNHLDI 188
Query: 488 DSITAVEAGLRAYDGALLVVSHDEAFLSGI 517
++I +E L A + ++++SHD FL+ +
Sbjct: 189 NTIRWLETILTARNSTMIIISHDRHFLNSV 218