Pairwise Alignments
Query, 533 a.a., ABC transporter permease from Agrobacterium fabrum C58
Subject, 642 a.a., DNA-binding ATPase involved in replication from Pseudomonas putida KT2440
Score = 199 bits (507), Expect = 2e-55
Identities = 167/540 (30%), Positives = 263/540 (48%), Gaps = 83/540 (15%)
Query: 19 LLFSDINLRFGL--------------ERVGLVGRNGVGKTTLLKLITGELLPSTGTVSLS 64
L FSD++L FG ERV ++GRNG GK+++L+L+ GE G + +
Sbjct: 4 LKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMLRLVKGEQKGDDGEIWRA 63
Query: 65 G--RIGVLRQSVQVGDDETIADLF--------EARHALHVLSRAQAGMATLEELGDVD-- 112
+IG L Q + V D+ T+ D+ E H LS G LE+L V
Sbjct: 64 PGLKIGELPQELPVADERTVFDVVAAGLDGVGELLAQFHHLSMNIQGDEDLEKLMHVQHE 123
Query: 113 ------WMLEERIAEALAVVGLDTSPLTPLSALSGGQRTRAALAAQIHAVPDFLILDEPT 166
W L++ + L+ + L L+ LSGG R R LA + + PD L+LDEPT
Sbjct: 124 LEARDGWRLQQVVESTLSRLQLPADKT--LAELSGGWRRRVLLAQALVSEPDLLLLDEPT 181
Query: 167 NNLDRDSRMFLVDFLAVWRGGAIVVSHDRELLETL-DAIVEMNTLGAMRYGGKWSHYRAQ 225
N+LD + +L + L + G + ++HDR L+ L I+E++ G + + G ++ +
Sbjct: 182 NHLDIGAIAWLEEALRGFNGAVLFITHDRSFLQNLATRILELDRGGLIDWNGDYASFLVH 241
Query: 226 KVLELAAAEQDIASAEKRLSEVRKKSQEALERKARRDAKGAAKAAKGDMPRIAAGGMKRR 285
K LAA E A +KRL++ ++ ++ + R+ +G +A K R+ G + R
Sbjct: 242 KEAALAAEETANALFDKRLAQEEVWIRQGIKARRTRN-EGRVRALKA--LRVERGERRER 298
Query: 286 AEKTSGDNANLASRLKTEAADDLRTARERIEILQDVTVTLPPSGLHATKTVLSLQGLTAG 345
K + ++ EAAD + +++ +L++V S HA +L
Sbjct: 299 QGK---------ANIQIEAAD---KSGKQVMVLENV------SFHHADGPLL-------- 332
Query: 346 YFPENPVLKDLSFEITGPQRVAVTGPNGSGKTTLLSVITGDLEPFAGSVYLG--VSGAFL 403
+KD S + R+ + G NG+GKTTLL ++ GDLEP AG V G + A+
Sbjct: 333 -------VKDFSMVLQRQDRIGLLGANGTGKTTLLKMMLGDLEPTAGKVERGTKLEVAYF 385
Query: 404 DQQVSLLDATLSIRDN------FLRLNPQSGENACRAALARFMFRADAALRIVGTLSGGQ 457
DQ LD ++ DN F+ ++ Q+ + L F+F A V LSGG+
Sbjct: 386 DQMRHQLDLEKTVIDNLAEGRDFIEIDGQN--RHVLSYLGDFLFSPQRARTPVKALSGGE 443
Query: 458 MLRAGLACVLGGPQPPQLLILDEPTNHLDIDSITAVEAGLRAYDGALLVVSHDEAFLSGI 517
R LA + +P LL+LDEPTN LD++++ +E L Y G +L+VSHD AFL +
Sbjct: 444 RARLLLAKLFS--KPANLLVLDEPTNDLDVETLELLEEVLSNYKGTVLMVSHDRAFLDNV 501
Score = 92.4 bits (228), Expect = 4e-23
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 5 ITLSDLSWATPDGHLLFSDINLRFGLE-RVGLVGRNGVGKTTLLKLITGELLPSTGTVSL 63
+ L ++S+ DG LL D ++ + R+GL+G NG GKTTLLK++ G+L P+ G
Sbjct: 317 MVLENVSFHHADGPLLVKDFSMVLQRQDRIGLLGANGTGKTTLLKMMLGDLEPTAG---- 372
Query: 64 SGRIGVLRQSVQVGDDETIADLFEARHALHVLSRAQAGMATLEELGDVDWMLEERIAEAL 123
V+ G +A + RH L + +A + ++D ++
Sbjct: 373 ---------KVERGTKLEVAYFDQMRHQLDLEKTVIDNLAEGRDFIEIDGQNRHVLSYLG 423
Query: 124 AVVGLDTSPLTPLSALSGGQRTRAALAAQIHAVPDFLILDEPTNNLDRDSRMFLVDFLAV 183
+ TP+ ALSGG+R R LA + L+LDEPTN+LD ++ L + L+
Sbjct: 424 DFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVLSN 483
Query: 184 WRGGAIVVSHDRELLETL 201
++G ++VSHDR L+ +
Sbjct: 484 YKGTVLMVSHDRAFLDNV 501
Score = 79.0 bits (193), Expect = 5e-19
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 44/217 (20%)
Query: 347 FPENPVLKDLSFEITGPQRVAVTGPNGSGKTTLLSVITGDLEPFAGSVYL--GVSGAFLD 404
F P+L +S++I +RV + G NG+GK+++L ++ G+ + G ++ G+ L
Sbjct: 13 FGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMLRLVKGEQKGDDGEIWRAPGLKIGELP 72
Query: 405 QQVSLLD---------------ATLSIRDNFLRLNPQSGEN------------------- 430
Q++ + D L + + L +N Q E+
Sbjct: 73 QELPVADERTVFDVVAAGLDGVGELLAQFHHLSMNIQGDEDLEKLMHVQHELEARDGWRL 132
Query: 431 --ACRAALARFMFRADAALRIVGTLSGGQMLRAGLACVLGGPQPPQLLILDEPTNHLDID 488
+ L+R AD L LSGG R LA L P LL+LDEPTNHLDI
Sbjct: 133 QQVVESTLSRLQLPADKTL---AELSGGWRRRVLLAQAL--VSEPDLLLLDEPTNHLDIG 187
Query: 489 SITAVEAGLRAYDGALLVVSHDEAFLSGIGIDRRLEL 525
+I +E LR ++GA+L ++HD +FL + R LEL
Sbjct: 188 AIAWLEEALRGFNGAVLFITHDRSFLQNLA-TRILEL 223