Pairwise Alignments

Query, 600 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

 Score =  279 bits (713), Expect = 3e-79
 Identities = 191/582 (32%), Positives = 307/582 (52%), Gaps = 31/582 (5%)

Query: 27  RKALVGFIIVLVVASTLAEVMVPVFS--GRIVDAIAGD---NGGANAGDGALRAFVIVVA 81
           R+    F+ +LVV    + + V +FS   RI+D   G    N  +      +   V+++ 
Sbjct: 34  RQVWPSFVALLVVGLVASLIEVAMFSYLSRIIDLAQGTPNANFFSEHSGELIWMLVVILL 93

Query: 82  LGFTSVVLRWFIFNGIIRLTLKTMADVTNNGFHKVQRFSTDWHANSFAGSTVRKITR--- 138
           L      L   + +  I   + ++    N+ +  V + S ++  + FAG   ++I +   
Sbjct: 94  LRPLFFGLHDLLVHQTINPGMTSLIRWQNHTY--VLKQSLNFFQSDFAGRIAQRIMQTGN 151

Query: 139 -----GMWALDSLNDLLLVALLPSIVMLVGATVVLGSYWPVMGLIVGLGSLIYIGVTVGL 193
                 + A+D+L  +L+ A+  S+V+   A   L    P++  IV   + ++  V    
Sbjct: 152 SLRDSAVQAVDALWHVLIYAIT-SLVLFAEADWRL--MLPLLAWIVSYIAALFYFVPRVK 208

Query: 194 SMGYVSPAARLANAWDTRLGGALADAISCNAVVKAFGAETREETRLGHVLVKWDNRTRRT 253
               VS  AR      ++L G + D  +  A +K F     E+      + +   +T+  
Sbjct: 209 ERSVVSSDAR------SKLMGRIVDGYTNIATLKLFAHTDYEQQYAREAIREQTEKTQLA 262

Query: 254 WKRGTLNGTIQSFMMVSMQAGILGTGLIMWQKGLATAGDITFVLAMFFVLQGYLRDVGQD 313
            +  T    + + +   +     G  L +W + L T G I     +   +      +   
Sbjct: 263 SRVITSMDVVITTLNGLLVVATTGLALWLWSQSLITVGAIALATGLVIRIVNMSGWIMWV 322

Query: 314 IRNLQRAVNDMEELVLLDKMPLGVEDRPDAKRINIGKGEIVFDHVTFQYGAHATPLYEDF 373
           +  +   +  +++ +     P+ V D P+A  + + +G + F  V F YG  AT + E  
Sbjct: 323 VNGIFENIGMVQDGLQTIAQPVTVTDPPNAPALKVSRGAVRFVDVDFHYGK-ATNVIEGL 381

Query: 374 SVTIKPGERVGLVGHSGSGKTTFVKLIQRLYDIKAGAIRIDGQNIADVTQASLRGQIAIV 433
           ++ I+PGE++GL+G SG+GK+T V L+ RLYD++ G I IDGQ+IA V+QASLR QI ++
Sbjct: 382 NLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRILIDGQDIAKVSQASLRAQIGMI 441

Query: 434 QQEPILFHRTLAENIAYGRPDASRREIEQAAKQASAHDFIMSLPK-----GYETMVGERG 488
            Q+  L HR++ EN+ YGRP AS  E+ +A ++A A +FI  L       G++  VGERG
Sbjct: 442 TQDTSLLHRSIRENLLYGRPGASDAELHEAVRRARADEFIPQLSDAQGRTGFDAHVGERG 501

Query: 489 VKLSGGERQRVAIARAFLADAPVLILDEATSSLDSESEVQIQQAMERLMDGRTTLVIAHR 548
           VKLSGG+RQR+AIAR  L +AP+LI+DEATS+LDSE E  IQ+++E LM G+T + IAHR
Sbjct: 502 VKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVEAAIQESLETLMQGKTVIAIAHR 561

Query: 549 LSTVRALDRLLVFDKGRIVEEGDHQALIRLHDGIYRRLFERQ 590
           LST+  +DRL+V DKGRIVE G H  L+    G+Y RL+  Q
Sbjct: 562 LSTIARMDRLVVLDKGRIVESGSHSELLE-QQGLYARLWHHQ 602