Pairwise Alignments

Query, 268 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  218 bits (556), Expect = 9e-62
 Identities = 117/270 (43%), Positives = 170/270 (62%), Gaps = 6/270 (2%)

Query: 3   RNKSALAGLIIVLFFAVLAIAAPILPIADPVATSWSAIRKAP---SAAHW---LGTDDLG 56
           RNK A+ GL  +      A+ AP +   DP       +   P       W   LGTD+LG
Sbjct: 34  RNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELG 93

Query: 57  RDILSRMIYGARASLMAGVVSVMIAVVIGVPFGLIAGYFGGWVDMVISRITEALLAMPFL 116
           RD+LSR+I GAR SL+ G+ SV+++++ G+  GL+AG+F   +   I R+ + +LA+P L
Sbjct: 94  RDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSL 153

Query: 117 IMAIALAAFLGPSLTNAMIAIGLSAMPIFVRLTRGQVLAVKMEDYVEGARSIGLNHIDIM 176
           ++A+A+ A LGP L N +IAI + ++P +VRLTR  V+     DYV  AR  G     +M
Sbjct: 154 LLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLM 213

Query: 177 TRYILPNVFAPIIVQATLTVATAIIAEASLSFLGLGQQAPAPSWGSMLNTAKNFLSQAPW 236
              +LPN  AP+IVQATL+ ++AI+  A+L FLGLG Q P P WG+ML +A++++ +A W
Sbjct: 214 FVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWW 273

Query: 237 MTLWPGIAIFLVVIGFNLLGDGLRDALDPR 266
           +   PG+ I L V+  NL+GDGLRDALDP+
Sbjct: 274 VVSLPGLTILLSVLAINLMGDGLRDALDPK 303