Pairwise Alignments

Query, 502 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  167 bits (422), Expect = 1e-45
 Identities = 131/471 (27%), Positives = 212/471 (45%), Gaps = 36/471 (7%)

Query: 67  IVPQLATEWAWSEGGKVLTMKIRDGVKFHDGE------TLDAAAVVATIERNMTLPESRR 120
           ++P LAT+W  S+ GK  T  +R+GVKFH  +        +A  V+ T  R +      R
Sbjct: 71  VIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPFR 130

Query: 121 KSELS------------SVEKVEATGPLDVKFTLKTPDVTLLAQLSDRAGMIVAPKAAKE 168
           K+  +            ++ KVE      VKFTL   D   +  L+     I + + A +
Sbjct: 131 KAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYADQ 190

Query: 169 L-----GANFGSKPVCAGPFKFVERIQQDRIVLEKFADYWDKDKILVDKIVYLPIPDTTV 223
           L      A+   KP+  GPF F +  +  +I  +   DYW  + + +D +++    D +V
Sbjct: 191 LLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDASV 250

Query: 224 KLANLRAGDLDIAERISASDAESVKNDPKLTYADVIG--PGYMAMYVNIN-NGARADNPL 280
           ++  L+  +  +      +D E +K D  L      G   GY+A  V     G+   NP+
Sbjct: 251 RMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEANPM 310

Query: 281 GKDKRLRQAFSYAIDREAIGQIVFEGTSKAGNQSFPPTSPWFNQNLPVPTRDIDKAKQLM 340
            + K +RQA   A+D++ I + V++G  +    + PPT   ++ ++     D +KAKQL+
Sbjct: 311 AQLK-VRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFDPEKAKQLL 369

Query: 341 KEAGY-ETLDVEL-----QHANNTTQTQMMQVIQSMVAEAGFNVTLKATEFATLLSEQTA 394
           KEAG  E  ++ L     Q   N     M +++QS  A+ G    + + E+   +     
Sbjct: 370 KEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKRSKG 429

Query: 395 GNYQLSRSDWSG-RIDPDGNLHQFVTCKG--GINDVKYCNPEVDKLLNEARASTEDAVRK 451
           G        WSG   DPD  L     C    G N  K+C    D L+ +A+A+++ A R 
Sbjct: 430 GEQGAMLIGWSGDNGDPDNWLGTLYGCDAVDGNNFSKWCYKPYDDLIKQAKATSDQAKRT 489

Query: 452 EKYDAASVILNDDMPIIYLGHQPYAYAISNKVKGWAPSPDGMIRLLGVSKD 502
           E Y  A  IL + +PI  + H      +S KVK +  SP  +    GVS D
Sbjct: 490 ELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSVD 540