Pairwise Alignments

Query, 502 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  157 bits (397), Expect = 9e-43
 Identities = 134/536 (25%), Positives = 239/536 (44%), Gaps = 40/536 (7%)

Query: 1   MKKIQTLTAALLASAVLAVPALSSELRIGLNDDADV-LDPAQSRTFVGRIVYTAMCDKLV 59
           M+ +  L+A L    V   P L +   +  ++ +    D AQ  +         + ++LV
Sbjct: 1   MRHVTCLSALLALGLVSQSPVLLANNLVFCSEGSPAGFDTAQYTSATDNDAAEPIYNRLV 60

Query: 60  DISQDMKIV-PQLATEWAWSEGGKVLTMKIRDGVKFHDGE------TLDAAAVVATIERN 112
           +  +    V P LAT W  S+ G   T  +R+GV+FH  +      T +A  V+ T  R 
Sbjct: 61  EFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFNRM 120

Query: 113 MTLPESRRKSELS------------SVEKVEATGPLDVKFTLKTPDVTLLAQLSDRAGMI 160
           +      R++  +            ++ +VE T PL V FTL T D   +  L+     I
Sbjct: 121 LDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFASI 180

Query: 161 VAPKAAKELGAN-----FGSKPVCAGPFKFVERIQQDRIVLEKFADYWDKDKILVDKIVY 215
           ++ + A++L A+        +P+  GPF F    +  +I  +   DYW  +++ +D +V+
Sbjct: 181 LSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVF 240

Query: 216 LPIPDTTVKLANLRAGDLDIAERISASDAESVKNDPKLTYADVIGPGYMAMYVNINNGAR 275
               D +V++  LR  +  +      +D  ++K D  L       PG+   Y+  N    
Sbjct: 241 SINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQ--PGFNLGYIAYNT--- 295

Query: 276 ADNPLGKDKRLRQAFSYAIDREAIGQIVFEGTSKAGNQSFPPTSPWFNQNLPVPTRDIDK 335
             +P      +RQA   A+++EAI Q V++   +    + PPT   ++ ++       +K
Sbjct: 296 -QHPPFDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEK 354

Query: 336 AKQLMKEAGYE-----TL-DVELQHANNTTQTQMMQVIQSMVAEAGFNVTLKATEFATLL 389
           A+QL+++AG +     TL  + +Q   N     M +++Q+  ++ GF V + + E+   L
Sbjct: 355 ARQLIQQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYL 414

Query: 390 SEQTAGNYQLSRSDWSG-RIDPDGNLHQFVTCK--GGINDVKYCNPEVDKLLNEARASTE 446
                G + ++   W+G   DPD  L    +C   G  N  ++C+P+ D L+ +A+  T+
Sbjct: 415 KRMKNGEHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQAKQVTD 474

Query: 447 DAVRKEKYDAASVILNDDMPIIYLGHQPYAYAISNKVKGWAPSPDGMIRLLGVSKD 502
              R   Y  A   L   +PI  + H   +  +S KV  +  SP G     GVS D
Sbjct: 475 RTQRTALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSVD 530