Pairwise Alignments

Query, 492 a.a., LuxR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  106 bits (265), Expect = 4e-27
 Identities = 100/375 (26%), Positives = 161/375 (42%), Gaps = 35/375 (9%)

Query: 44  EMHRKEAISELGADT-ESYRRNFTLRYRNNHLLDEGQYPLERLLAGETF------EDVTV 96
           E H +  +  L A   E+   +FT  Y + H  D   YPL   L    +      ED   
Sbjct: 310 EYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPEDALW 369

Query: 97  EISPSDDETEC------------------WVHTVRGLILEDAGAKPDVLVLIIR-DETPR 137
             +  D ET                    WV  +  +I  + G +P +  L+I   ET R
Sbjct: 370 AQAYCDSETAAGRDHSLDYRVIRADGQPLWVRNIVSMI--EHGHQPVMRGLMIDISETKR 427

Query: 138 FE-----AEARFESAFNANPAPGLICRLEDERFIRVNQGFLEMTGFSREEIIGVSVEELG 192
            E     +E +F S F   P   LI R  D   + VN+ F E  G   +++IG +  +L 
Sbjct: 428 TEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLD 487

Query: 193 LFSECETGEDALKRLHEGRIIRQREALIPIPGGDRLV-IVAGETIAVAEEPCMLFTFADL 251
           L+    +G   L+RLH+G I R  E       G     + + ET  +   P ++    D+
Sbjct: 488 LWGVEGSGPLLLERLHQGGI-RNLEMSFRRSNGQLFTGLTSAETFELDGTPALVVAVRDI 546

Query: 252 DGRRKAQNALRQSEERFFKSFRLSPVPAAISRLDDFVLTEVNDAFLTLCGRKEAEVVGKT 311
              ++ Q  L+ SEE+F K+F  SP    +SR  D +L EVN+ F  L G      + +T
Sbjct: 547 SQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQT 606

Query: 312 ASELRLWDDVPARRDIEKRLKDNIPIRNEAMRMNLADDGTAECIVSAERAEINDQLCVIW 371
           + +L +W D+  R+ +  +L  +  +R+    +  +D     C +SA    I    C++ 
Sbjct: 607 SLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHIRRSDGQIRLCELSARPLPITGVDCMLT 666

Query: 372 AIQDVTERRRSENEL 386
             +D+TER   + +L
Sbjct: 667 IARDITERHLMQEKL 681



 Score = 37.0 bits (84), Expect = 4e-06
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 6/113 (5%)

Query: 75  LDEGQYPLERLLAGETFEDVTVEISPSDDETECWVHTVRGLILEDAGAKPDVLVLIIRDE 134
           L+E +  +++L       D T  I  SD +      + R L +       D ++ I RD 
Sbjct: 616 LNERKRLVDQLNRDGFVRDFTCHIRRSDGQIRLCELSARPLPITGV----DCMLTIARDI 671

Query: 135 TPRFEAEARFESAFNA--NPAPGLICRLEDERFIRVNQGFLEMTGFSREEIIG 185
           T R   + + + A     N A G++    D+R   VN+ F E+TG+S  E +G
Sbjct: 672 TERHLMQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGYSEIEALG 724