Pairwise Alignments

Query, 518 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 451 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

 Score =  258 bits (658), Expect = 4e-73
 Identities = 158/423 (37%), Positives = 230/423 (54%), Gaps = 5/423 (1%)

Query: 91  GPTKDIPFLKNQTRLTFARCGVTDPLSLEDYRNYQGMKGLEKAVT-MEPLAIVAQVTESG 149
           GP   I        LT+      +P+ L++Y+   G     KA   M    IV  V ++G
Sbjct: 7   GPANLIKRSPETHPLTWRLRDDAEPVWLDEYQAKNGYAAARKAFADMAQDDIVQTVKDAG 66

Query: 150 LRGRGGAGFPTGIKWKTVA-DARADQKYIVCNADEGDSGTFADRMIMEGDPFVLIEGMAI 208
           L+GRGGAGFPTG+KW  +  D   + +Y++CNADE +  T+ DRM+ME  P +LIEGM I
Sbjct: 67  LKGRGGAGFPTGVKWGLMPKDESINIRYLLCNADEMEPNTWKDRMLMEQLPHLLIEGMLI 126

Query: 209 AGLAVGATKGFIYTRSEYPYAIKVMEKAIEIARREGILGSSVLGSGRAFDMEVRMGAGAY 268
           +  A+   +G+I+ R EY  A K + +A+E A+  G+LG ++LGSG  F++ V  GAG Y
Sbjct: 127 SARALKTYRGYIFLRGEYTTAAKHLNRAVEEAKAAGLLGKNILGSGFDFELFVHTGAGRY 186

Query: 269 VCGEETSLLNSLEGKRGTVRAKPPLPALQGLFGKPTVVNNVISLASIPVIMDRGAAFYRD 328
           +CGEET+L+NSLEG+R   R+KPP PA  G++GKPT VNNV +L ++P I+  G  +Y+ 
Sbjct: 187 ICGEETALINSLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIIADGVDWYKS 246

Query: 329 FGVGRSH--GTIPIQLAGNIRYGGLYETAFGLTLGQLVNDIGGGTITGRPVKAVQVGGPL 386
                S   GT  +  +G ++  GL+E  FG+T  +L  D  GG   G  +KA Q GG  
Sbjct: 247 LAREGSEDMGTKLMGFSGKVKNPGLWELPFGVTARELFEDYAGGMRDGYTLKAWQPGGAG 306

Query: 387 GAYFPVSLFDTIFDYEAFTAAGGLIGHAGIVVFDDTADMLHQARFALEFCAVESCGKCTP 446
             +      D           G  +G    +  D+T +M+   R   +F A ESCG CTP
Sbjct: 307 TGFLLPEHLDAQMYAGGIGKVGTRMGTGLAMAVDNTVNMVSLLRNMEQFFARESCGFCTP 366

Query: 447 CRIGSTRGVETVDKIALGIEREKNTALLEDLCETMKFG-SLCALGGFTPYPVMSALRHFP 505
           CR G    V+ +  +  G  RE +   L  L   +  G + CA       P+ SA+++F 
Sbjct: 367 CRDGLPWSVKLLMALENGEGREGDIETLLGLVGFLGPGKTFCAHAPGAVEPLGSAIKYFR 426

Query: 506 QDF 508
            +F
Sbjct: 427 SEF 429