Pairwise Alignments

Query, 518 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 457 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  284 bits (726), Expect = 5e-81
 Identities = 159/407 (39%), Positives = 226/407 (55%), Gaps = 16/407 (3%)

Query: 117 SLEDYRNYQGMKGLEKA--------------VTMEPLAIVAQVTESGLRGRGGAGFPTGI 162
           SL+DY    G + L K               V M    ++A + ES LRGRGGAGFPTG+
Sbjct: 38  SLKDYVARGGYQALRKVLGQDGSPPAGDPPVVGMTQDQVIATLKESALRGRGGAGFPTGL 97

Query: 163 KWKTVADARADQKYIVCNADEGDSGTFADRMIMEGDPFVLIEGMAIAGLAVGATKGFIYT 222
           KW  +      QKY+VCN+DEG+ GT  DR I+  +P ++IEGMAIA  A+G + G+ Y 
Sbjct: 98  KWSFMPRQFPGQKYLVCNSDEGEPGTCKDRDILLYNPHIVIEGMAIAAYAMGISVGYNYI 157

Query: 223 RSEYPYAIKVMEKAIEIARREGILGSSVLGSGRAFDMEVRMGAGAYVCGEETSLLNSLEG 282
             E   A +  E A+E AR  G LG  ++GSG  F +    G GAY+CGEET+LL SLEG
Sbjct: 158 HGEIFEAYERFEAALEEARAAGFLGDGIMGSGFNFQLHAAHGFGAYICGEETALLESLEG 217

Query: 283 KRGTVRAKPPLPALQGLFGKPTVVNNVISLASIPVIMDRGAAFYRDFGVGRSHGTIPIQL 342
           K+G  R KPP PA  GL+GKPT +NN  + A++P I+  G A Y   G   + GT    +
Sbjct: 218 KKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGAAYLACGKPNNGGTKIYSV 277

Query: 343 AGNIRYGGLYETAFGLTLGQLVNDIGGGTITGRPVKAVQVGGPLGAYFPVS-LFDTIFDY 401
           +G++   G YE   G    +L+ ++ GG   GR +KAV  GG      P   + +   DY
Sbjct: 278 SGDVEMPGNYEVPLGTPFSKLL-ELAGGVRKGRTLKAVIPGGSSAPVLPAHIMMECTMDY 336

Query: 402 EAFTAAGGLIGHAGIVVFDDTADMLHQARFALEFCAVESCGKCTPCRIGSTRGVETVDKI 461
           ++   AG ++G   ++V DD+  M+   +    F   ESCG+CTPCR G+      VD+I
Sbjct: 337 DSIAKAGSMLGSGAVIVMDDSRCMVESLKRLSYFYMHESCGQCTPCREGTGWLWRMVDRI 396

Query: 462 ALGIEREKNTALLEDLCETMKFGSLCALGGFTPYPVMSALRHFPQDF 508
             G  +  + ALL+++ E +   ++CALG     PV + ++HF  +F
Sbjct: 397 DRGEGKPADMALLDNVAENIMGRTICALGDAAAMPVRAMIKHFRHEF 443