Pairwise Alignments

Query, 518 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 445 a.a., NADH:ubiquinone oxidoreductase, chain F from Escherichia coli BL21

 Score =  284 bits (727), Expect = 4e-81
 Identities = 154/397 (38%), Positives = 234/397 (58%), Gaps = 3/397 (0%)

Query: 115 PLSLEDYRNYQGMKGLEKAVT-MEPLAIVAQVTESGLRGRGGAGFPTGIKWKTVA-DARA 172
           P+ L++YR+  G +G  KA+T + P  IV QV ++GL+GRGGAGF TG+KW  +  D   
Sbjct: 23  PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82

Query: 173 DQKYIVCNADEGDSGTFADRMIMEGDPFVLIEGMAIAGLAVGATKGFIYTRSEYPYAIKV 232
           + +Y++CNADE + GT+ DR++ME  P +L+EGM I+  A+ A +G+I+ R EY  A   
Sbjct: 83  NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142

Query: 233 MEKAIEIARREGILGSSVLGSGRAFDMEVRMGAGAYVCGEETSLLNSLEGKRGTVRAKPP 292
           + +AI  A   G+LG +++G+G  F++ V  GAG Y+CGEET+L+NSLEG+R   R+KPP
Sbjct: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202

Query: 293 LPALQGLFGKPTVVNNVISLASIPVIMDRGAAFYRDFGVGRSHGTIPIQLAGNIRYGGLY 352
            PA  G +GKPT VNNV +L ++P I+  G  +Y++    +  GT  +  +G ++  GL+
Sbjct: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262

Query: 353 ETAFGLTLGQLVNDIGGGTITGRPVKAVQVGGPLGAYFPVSLFDTIFDYEAFTAAGGLIG 412
           E  FG T  +++ D  GG   G   KA Q GG    +   +  D   ++E+   AG  +G
Sbjct: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322

Query: 413 HAGIVVFDDTADMLHQARFALEFCAVESCGKCTPCRIGSTRGVETVDKIALGIEREKNTA 472
            A  +  D   +M+   R   EF A ESCG CTPCR G    V+ +  +  G  +  +  
Sbjct: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382

Query: 473 LLEDLCETMKFG-SLCALGGFTPYPVMSALRHFPQDF 508
            LE LC  +  G + CA       P+ SA+++F ++F
Sbjct: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419