Pairwise Alignments

Query, 324 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

 Score =  286 bits (732), Expect = 5e-82
 Identities = 144/314 (45%), Positives = 202/314 (64%), Gaps = 1/314 (0%)

Query: 4   SVIDVRNLKVEFPGRRGTVTALSDISLSIRPGEILGVVGESGAGKSMTGLAIQGLLEKPG 63
           S++ + NL V F G    V  +  + L +  GEIL +VGESG+GKS+T +A+ GL++ PG
Sbjct: 2   SLLQINNLNVRF-GDANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPG 60

Query: 64  RIADGEIWLGSRRIDQLDDRAMESIRGREIGAIFQDPLTSLNPLFTVGAQLVETIRQHLP 123
           RI    +      + +L  R    + G++I  +FQDP+T+LNP +TVG Q+ E +RQHL 
Sbjct: 61  RITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLG 120

Query: 124 LSKADARARAIQLLRDVGIPSPADRIDHYPHQFSGGMRQRVVIALALSASPKLIIADEPT 183
           L    AR RA++LL+ V IP+   R+D YPHQ SGGM QRV IA+A++  PKL+IADEPT
Sbjct: 121 LKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPT 180

Query: 184 TALDVSIQAQIISLLRRLCKEKQTAVMLVTHDMGVIAEAADRVAVLYAGRLIEVGPVEQV 243
           TALDV+IQAQI+ LL  L KE+  A++L+THD+ V+AE A RV V+YAG+ +EVG V ++
Sbjct: 181 TALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPEL 240

Query: 244 LHEPRHPYTQGLMASIPSLGARVERLNQIDGAMPRLDAIPPGCAFNPRCSFAGPRCLRQR 303
              P HPY++ L+A+IP      ERL  + G +P     P GC  +PRC +    C RQR
Sbjct: 241 FDVPAHPYSEALLAAIPEHSIGAERLATLPGIVPGRYDRPVGCLLSPRCPYVQDNCRRQR 300

Query: 304 PELETVGNGASACW 317
           P L+   +    C+
Sbjct: 301 PPLDPQAHSLVRCF 314