Pairwise Alignments

Query, 315 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

 Score =  220 bits (561), Expect = 3e-62
 Identities = 116/294 (39%), Positives = 182/294 (61%), Gaps = 19/294 (6%)

Query: 25  YW-SFSRSKSAKISALVLAILILAAIFAPWIAPQNPYDGASLDMWKAEL--PPIWQEGGE 81
           +W +FS++K A    L + +++  AIFAPW+AP NP +      ++  L  PP W EGG+
Sbjct: 23  FWQAFSKNKGAVAGLLFMLLIVFCAIFAPWVAPHNPSE-----QYRDFLLTPPAWLEGGQ 77

Query: 82  WPFLLGTDTQGRDMLSAILYGTRISIVIGVASVVLSLVIGMTAGLVAGYFGGFADGLLMR 141
             FLLGTD  GRD+LS ++ G+R+S++IG++SVV+SL+ G+  GL AG+F       +MR
Sbjct: 78  MQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIMR 137

Query: 142 IGDITLSIPTILVAILVSTVVRQMLPDSLREVGASAVLILAIALSAWVQYARTVRAQAIV 201
           + DI L++P++L+A+ +  ++   L ++          ++AIA+ +   Y R  RA  + 
Sbjct: 138 LMDIMLALPSLLLAVAIVAILGPGLINT----------VIAIAIVSLPSYVRLTRAAVMG 187

Query: 202 ETGKDYVQAAKLIGVPARRIMAAHILPNTLTPIMVAATLNFGMAILTEATLSFLGIGMPP 261
           E  +DYV AA+L G    R+M   +LPN + P++V ATL+F  AIL  A L FLG+G+ P
Sbjct: 188 ELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQP 247

Query: 262 SQPSLGTLIRIGNQFLFSGSWWIVLFPVFQLCLLVVTVNLLGDWLRDALNPKLR 315
             P  GT++     ++   +WW+V  P   + L V+ +NL+GD LRDAL+PKL+
Sbjct: 248 PTPEWGTMLASARDYI-ERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK 300