Pairwise Alignments

Query, 315 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  196 bits (499), Expect = 4e-55
 Identities = 107/296 (36%), Positives = 179/296 (60%), Gaps = 20/296 (6%)

Query: 20  RDSDLYWSFSRSKSAKISALVLAILILAAIFAPWIAPQNPYDGASLDMWKAELPPIWQEG 79
           + + L+ +  +++ + I   +L +++L A+FAP IAP   YD    ++     PP  +  
Sbjct: 11  KPTTLWQALFQNRLSWIGIGLLVMIVLVALFAPLIAP---YDPLQQNIAYRLEPPSAE-- 65

Query: 80  GEWPFLLGTDTQGRDMLSAILYGTRISIVIGVASVVLSLVIGMTAGLVAGYFGGFADGLL 139
               F LGTDT GRD+LS ++YGTR+S+++G  +V++++V+G   G++AGY GG  D L+
Sbjct: 66  ----FWLGTDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLI 121

Query: 140 MRIGDITLSIPTILVAILVSTVVRQMLPDSLREVGASAVLILAIALSAWVQYARTVRAQA 199
               D+ LS PT+L+ ++V+ ++   L +          LI+AIA++    + R  RA  
Sbjct: 122 TGFVDVLLSFPTLLLGLMVAAMLGASLEN----------LIIAIAITEIAPFVRIARAPT 171

Query: 200 IVETGKDYVQAAKLIGVPARRIMAAHILPNTLTPIMVAATLNFGMAILTEATLSFLGIGM 259
           I    +D+V+A + +G    R+M  HILPN ++ ++V   L    AI TEA+LSF+G+G+
Sbjct: 172 IALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGV 231

Query: 260 PPSQPSLGTLIRIGNQFLFSGSWWIVLFPVFQLCLLVVTVNLLGDWLRDALNPKLR 315
           PP  P+ G++IR G + +   +WW+ +FP   + L V+ ++LLGD LRDA +PK R
Sbjct: 232 PPPAPTWGSMIREGFENILD-AWWLTVFPSLAILLTVLALSLLGDALRDANDPKTR 286