Pairwise Alignments

Query, 315 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 303 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  163 bits (412), Expect = 5e-45
 Identities = 97/297 (32%), Positives = 162/297 (54%), Gaps = 25/297 (8%)

Query: 22  SDLYWSFSRSKSAKISALVLAILILAAIFAPWIAP---QNPYDGASLDMWKAELPPIWQE 78
           S+ +  F R   A  + L + +LI  A+ APW+AP   +N +D   L+           +
Sbjct: 28  SEFWRRFRRQPVAMTAGLFVLLLIAVAVIAPWVAPFDAENYFDYDRLN-----------D 76

Query: 79  GGEWPFLLGTDTQGRDMLSAILYGTRISIVIGVASVVLSLVIGMTAGLVAGYFGGFADGL 138
           G       G D+ GRD+ S +L G +IS+  GV +V++   IG   GLVAGY+ G+ D +
Sbjct: 77  GPSMLHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVLIGAAIGTVLGLVAGYYEGWWDRI 136

Query: 139 LMRIGDITLSIPTILVAILVSTVVRQMLPDSLREVGASAVLILAIALSAWVQYARTVRAQ 198
           +MRI D+  + P IL+AI V  ++              A +I+A+A+ +   +AR VR  
Sbjct: 137 IMRICDVLFAFPGILLAIAVVAIMG----------SGMANVIIAVAVFSIPAFARLVRGN 186

Query: 199 AIVETGKDYVQAAKLIGVPARRIMAAHILPNTLTPIMVAATLNFGMAILTEATLSFLGIG 258
            +V   + ++++A+ +G     I+ +HILP T++ I+V  T+  G++I++ A+LSFLG+G
Sbjct: 187 TLVLKQQTFIESARSMGASDATILFSHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLG 246

Query: 259 MPPSQPSLGTLIRIGNQFLFSGSWWIVLFPVFQLCLLVVTVNLLGDWLRDALNPKLR 315
             P  P  G ++      +      + +FP   + L V+  NLLGD LRDAL+P+++
Sbjct: 247 AQPPTPEWGAMLNEARADMVIAP-HVAIFPSLAIFLTVLAFNLLGDGLRDALDPRIK 302