Pairwise Alignments

Query, 315 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 295 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  240 bits (612), Expect = 3e-68
 Identities = 120/286 (41%), Positives = 182/286 (63%), Gaps = 10/286 (3%)

Query: 28  FSRSKSAKISALVLAILILAAIFAPWIAPQNPYDGASLDMWKAELPPIWQEGGEWPFLLG 87
           F+RS  A +   ++ +++L A+FAP+++PQNPYD   LD+    + P  +    + FL G
Sbjct: 16  FARSPLAVMGLALIFLIVLMAVFAPYLSPQNPYDLMQLDIMDGRMAPGTESSTGFTFLFG 75

Query: 88  TDTQGRDMLSAILYGTRISIVIGVASVVLSLVIGMTAGLVAGYFGGFADGLLMRIGDITL 147
           +D QGRDMLSAILYG RIS+++G+ S  L+ +IG   GL A Y GG  +  +MR+ D+ L
Sbjct: 76  SDDQGRDMLSAILYGLRISLIVGLGSAALAFIIGTAFGLTAAYVGGRVETAMMRLVDLQL 135

Query: 148 SIPTILVAILVSTVVRQMLPDSLREVGASAVLILAIALSAWVQYARTVRAQAIVETGKDY 207
           S PTIL A+L+  ++ + + +          ++ AI L  W  YART R  A+ E  ++Y
Sbjct: 136 SFPTILSALLILALLGKSVGN----------VVFAIVLVEWATYARTARGAALTELRREY 185

Query: 208 VQAAKLIGVPARRIMAAHILPNTLTPIMVAATLNFGMAILTEATLSFLGIGMPPSQPSLG 267
           V+AA+ + +P R I+   +LPN L+P++V  T+    AI  EATLSFLG+G+P ++PSLG
Sbjct: 186 VEAARSLRLPHRNILFRQLLPNCLSPLVVLLTMQVARAITLEATLSFLGLGVPVTEPSLG 245

Query: 268 TLIRIGNQFLFSGSWWIVLFPVFQLCLLVVTVNLLGDWLRDALNPK 313
            LI  G +F+ SG++WI LFP   L + +  +NL+GD LR  ++PK
Sbjct: 246 LLISSGYEFILSGTYWIALFPGIALLVTIFAINLVGDRLRQLVDPK 291