Pairwise Alignments

Query, 413 a.a., D-amino acid dehydrogenase small subunit from Agrobacterium fabrum C58

Subject, 415 a.a., putative cis-4-hydroxy-D-proline oxidase from Pseudomonas putida KT2440

 Score =  202 bits (515), Expect = 1e-56
 Identities = 134/394 (34%), Positives = 200/394 (50%), Gaps = 6/394 (1%)

Query: 5   DVIVIGAGVVGLSAAIAAQGRGLSVTVIDREGPAAGASAGNAGAFAFTDILPLASPGILW 64
           D+ V+GAG+VG++ A+    +G  VT++DR+ P  GAS GNAG  A   + P+A   IL 
Sbjct: 8   DIAVVGAGIVGVACALQLARQGHRVTLVDRQAPGLGASFGNAGHLATEQVFPIADLSILK 67

Query: 65  KAPKWLLDPLGPLSVPPAYALKIAPWMFRFWRACAASKVEHSTAAQTAMMDLSRAELEPF 124
           + P+ LLDP+GPL +   Y  K  PW  R       +  + S A    + + S    +  
Sbjct: 68  RLPRMLLDPMGPLRLDWKYLPKAMPWFTRLLLNLRPAPFQRSVAGIRTLNEGSLGAWQRL 127

Query: 125 LRKTDTIAMLRKEGNLQVYESEAEFESSLAGWKAR-ERHGIEFRHLNTEQMSEIQPGIAP 183
           L       + +++G+L V+E + E   +L   + R ++  +     + E + E  P ++P
Sbjct: 128 LGSIGRSELFQEDGSLLVFE-KPESRQALEALRTRMQQQAVPVDFWSAETVREAAPQLSP 186

Query: 184 RFTCGTFTPGWFSIADPKFYTLALADHFRTIGGRIECLDVASLRPLEDGVEVVSHDGRTR 243
               G F P      DP      L +  +  G R     V   +    GV + S  G   
Sbjct: 187 SLLGGLFFPRTGHFIDPYRVVCELFEAAKASGVRFVQAQVDGGQLHSAGVSLASDQGML- 245

Query: 244 KAGKVVLAAGAFSHRIARSL-GEKIPLETERGYNTTLPAGAFDLRTQVTFGGHGFVVTRL 302
            A +V+++ GA S ++  +L G+++PL+TERGY+  LP     L   VT     F++T +
Sbjct: 246 NARQVLVSCGAHSAKLTAALTGKRVPLDTERGYHLMLPGEHQRLPFAVTSLERKFIMTPM 305

Query: 303 SSGIRVGGAVELGGLELPANFARSEALLAKAKA-FLPGLKTEGGKQWMGFRPSLPDSLPA 361
           + G+R+ G VE  GL+ P +  R+  L   +K  F   L  EG   WMGFRPSLPDSLP 
Sbjct: 306 AEGLRLAGTVEFAGLQAPPSMQRAWQLHRLSKGLFRHDLSVEGATPWMGFRPSLPDSLPV 365

Query: 362 IGQARHTARVVYAFGHGHLGLTQSAGTARIVADL 395
           I +     RV+ AFGH HLGLTQ+A TA  V  L
Sbjct: 366 IDRV-CDGRVLLAFGHQHLGLTQAAVTAEWVGRL 398