Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  103 bits (257), Expect = 3e-27
 Identities = 56/206 (27%), Positives = 109/206 (52%), Gaps = 3/206 (1%)

Query: 16  PQLLDGAVVTLQIAILSMVIGLSFAILLTLFRLSGNRVLGAFAAVWVEIARNTPALFQIY 75
           P  ++GA +TL++  L++VIG++   L+   + S  R+L     +++EI RNTP L QI+
Sbjct: 15  PVFINGAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIYIEIVRNTPFLVQIF 74

Query: 76  MAHFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDTQTRSGRSLGMTSMQT 135
           + +FGL +FG+ +  + A ++ +  N A Y AE  R  L+++P  Q  +   LG++  + 
Sbjct: 75  LLYFGLASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQIEAAECLGLSKWRI 134

Query: 136 -FRLIIMPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGVTQALNARSFRTFEFFA 194
            + +++ P + +V   PA       ++  S   +     +L  +   + + +FR+ E + 
Sbjct: 135 GWHVMLQPSIEKV--YPALTSQFLLMMQASAMASQISAEELTAIANTVQSDTFRSLETYI 192

Query: 195 LAAVIYYVIAKIVTLAARLLAARLFR 220
           + A +Y V++  + L    L   LFR
Sbjct: 193 VVAALYLVLSLFIKLVTWALGEYLFR 218