Pairwise Alignments

Query, 372 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 905 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  112 bits (279), Expect = 5e-29
 Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 21/338 (6%)

Query: 23  GMLLLLIVYAFTLQIYTGSSALPETLNNAAIAIVDEDQSPLSGRISTAFYPP-YFA--PP 79
           G + +++++ + + +          + N A AI D+DQ+P S      F    YFA  PP
Sbjct: 561 GAMFMMVIFGYGISL---------DVENLAFAIYDQDQTPQSRAYLEGFRSSRYFAEQPP 611

Query: 80  KQISIAEMDKRMDAGLDTFALNIPPDFQRRLMAGQQPAIQLNIDATRMSQAFSGGGYVQN 139
            + S  E+ +R+       AL IPP F R L AG+QP++    D     +A +   YV+ 
Sbjct: 612 IRDS-NELHRRLQRSEIKLALEIPPGFGRDLYAGRQPSVAAWFDGGMPFRAETSRNYVEA 670

Query: 140 IVTSEVQEYVNRYRGATTVPVDLTLRSRFNPELDKSWFGSINNIITAITMLSI--VLTGA 197
           +    +Q+           P    L +RF    D     +I   + A+ +  I  +LT  
Sbjct: 671 VHQENLQQLAELSSLPRNHPAAAKLETRFRYNQDVVSVNAIGPGVMALILAFIPAMLTAL 730

Query: 198 ALIREREHGTVEHLLVMPVTPLEIMLSKVWSMGLVVLVASAFSLFVVVKGLLAIPIEGSL 257
            ++RE+E G++ +    P+T LE +L K      V LV  A  L  + + L  +P +GS 
Sbjct: 731 GIVREKELGSITNFYATPLTRLEFLLGKQTPYLAVSLVNLAV-LVAMNRWLFGVPFKGSG 789

Query: 258 SLFLLGTALQLFAMTSMGIFLATVAGSMPQFGMLL---ILFLLPLQVLSGAMTPRESMPD 314
                G  L + A TSMG+ ++  A +  Q   +L   I+  LP    SG + PR S+  
Sbjct: 790 LTLAFGGLLYVLATTSMGLLIS--AFTRTQIAAILGTMIITSLPTIQFSGLIVPRSSLEG 847

Query: 315 IIQYIMLLAPNTHFVILAQSVLFRGGGLDVVWPQLLAL 352
               + +L P  HF+ +A     +   L  +WPQ LAL
Sbjct: 848 AAALMGMLFPAGHFLDIAVGTFTKALDLRQLWPQCLAL 885