Pairwise Alignments

Query, 372 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 375 a.a., Inner membrane transport permease YhhJ from Sphingobium sp. HT1-2

 Score =  462 bits (1189), Expect = e-135
 Identities = 234/364 (64%), Positives = 288/364 (79%)

Query: 6   SNIFQLGIKELRGLARDGMLLLLIVYAFTLQIYTGSSALPETLNNAAIAIVDEDQSPLSG 65
           SNI++LG+KEL  L RD ++L+LI++ FT+ IYT +++ PETL+NAAIAIVDED+SPLS 
Sbjct: 6   SNIYRLGVKELWSLWRDPIMLVLILFVFTVSIYTSANSKPETLHNAAIAIVDEDESPLSQ 65

Query: 66  RISTAFYPPYFAPPKQISIAEMDKRMDAGLDTFALNIPPDFQRRLMAGQQPAIQLNIDAT 125
           RI  AFYPP F  P+ I+ A++D  MDAG  TF L+IP  FQR ++AG+   IQLN DAT
Sbjct: 66  RIVAAFYPPQFTLPRMIAPAQIDPGMDAGDFTFVLHIPHGFQRDVLAGRTAEIQLNTDAT 125

Query: 126 RMSQAFSGGGYVQNIVTSEVQEYVNRYRGATTVPVDLTLRSRFNPELDKSWFGSINNIIT 185
           RMSQAFSG  YVQ I T+EV E+VNRYR  +   VDL +R+RFNP L+ +WFG++  II 
Sbjct: 126 RMSQAFSGSSYVQQIATAEVNEFVNRYRANSVPKVDLAVRARFNPTLNHTWFGALAQIIN 185

Query: 186 AITMLSIVLTGAALIREREHGTVEHLLVMPVTPLEIMLSKVWSMGLVVLVASAFSLFVVV 245
            I MLSI+LTGAALIREREHGT+EHLLVMPVTP EIMLSKVWSMGLVVL+AS+ S+ +VV
Sbjct: 186 QIAMLSIILTGAALIREREHGTIEHLLVMPVTPFEIMLSKVWSMGLVVLLASSLSINLVV 245

Query: 246 KGLLAIPIEGSLSLFLLGTALQLFAMTSMGIFLATVAGSMPQFGMLLILFLLPLQVLSGA 305
           +GL+ +P+ GSL+LF  G AL LF+ TSMGIFLAT+A +MPQFGML+IL LLPLQ+LSG 
Sbjct: 246 QGLMHVPVAGSLALFFAGAALVLFSTTSMGIFLATLARNMPQFGMLMILVLLPLQMLSGG 305

Query: 306 MTPRESMPDIIQYIMLLAPNTHFVILAQSVLFRGGGLDVVWPQLLALLAIGSALFIFALR 365
            TPRESMP ++Q +ML AP THFV L Q++LFRG G+ VVWPQ  A  AIG A F+ AL 
Sbjct: 306 TTPRESMPKLVQDVMLFAPTTHFVELGQAILFRGAGIGVVWPQFAATAAIGIAFFLIALT 365

Query: 366 RFRR 369
           RFRR
Sbjct: 366 RFRR 369