Pairwise Alignments

Query, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score =  931 bits (2405), Expect = 0.0
 Identities = 491/911 (53%), Positives = 628/911 (68%), Gaps = 11/911 (1%)

Query: 15  APVARLTDVRLAFGSTVALADISVEIPAGRMIGLIGPDGVGKSSLLSLISGARAIQKGNV 74
           AP      +   +G  +AL  +   +P G    LIGPDG GKS+LL LI+G + +Q+G +
Sbjct: 3   APALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGEL 62

Query: 75  EVLAGDMSDPRHREDTCPRIAYMPQGLGKNLYPTLSVFENIDFFGRLFGQDGRERKARIA 134
           +VL G +   RHR    P++A+MPQGLG NLYP LS+ ENI FF  LFG   RE + R+A
Sbjct: 63  QVLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQRMA 122

Query: 135 ELLKSTGLERFADRPAMKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRQFWEL 194
            LL++T L+ FA RPA KLSGGMKQKLGLCCALIH+PDLLILDEPTTGVDPLSRR+FWEL
Sbjct: 123 NLLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRFWEL 182

Query: 195 IDSIRAGRPGMSVIVATAYMEEAAGFDWLVAMDGGKILATGSPGELLERTSTANLDAAFI 254
           ++ +RA RP ++++VATAYMEEA  F+  + +DGG++LA G   EL   TS+  LD AF 
Sbjct: 183 VEQVRAQRPQLTLLVATAYMEEAEQFEHCLMLDGGRLLAAGPSHELAAVTSSGKLDDAFT 242

Query: 255 ALLPEEKRKDYHEVHIAPRRVTHDGDYAIEASHLSMRFGDFTAVDNVSFKIPRGEIFGFL 314
                 K + +  + I PR+ T DG  AIEA  L++RFGDFTAV+ VSF I RGEIFGFL
Sbjct: 243 HYQGAGKAQ-HQPLAIPPRQAT-DGPVAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFL 300

Query: 315 GSNGCGKSTTMKMLTGLLAASEGEAKLFGHKVDASDMAIRHRVGYMSQAFSLYSELTVRQ 374
           GSNGCGK+TTMK+LTGL+ ASEG A L G  VDASD+A R RVG+MSQ+FSLY EL+ RQ
Sbjct: 301 GSNGCGKTTTMKVLTGLMPASEGSASLLGRPVDASDLATRKRVGFMSQSFSLYGELSTRQ 360

Query: 375 NLDLHARLFKLPEATIQPRIAEMAERFDLGTVMDTLPDDLPLGIRQRLSLAVAMIHSPDI 434
           NL LHARLF LP+A    RI E+ ERFDL  + D     LPLG+RQRLSLAVA++H P++
Sbjct: 361 NLALHARLFDLPKAESAQRIDELIERFDLAAIADQPSGALPLGLRQRLSLAVAVLHRPEV 420

Query: 435 LILDEPTSGVDPVARDGFWQILADLSRNDNVTIFISTHFMNEAERCDRISLMHAGKVLIS 494
           LILDEPTSGVDP ARD FW++L +LSR   VTIF+STHFMNEA+RCDRISLMHAG+VL  
Sbjct: 421 LILDEPTSGVDPAARDDFWRLLVELSREQGVTIFLSTHFMNEAQRCDRISLMHAGRVLAC 480

Query: 495 DTPDAITKSRNAETLEEAFVAYLEDASGVKKAEPAIAPAPATEVVPTQHATPAR--KRFF 552
           DTPDA+      +TLE+AFV  LE A         +APA     V  Q +TP    +R F
Sbjct: 481 DTPDALQHQYQGDTLEDAFVRCLEQAQ-------ELAPAATDSNVLEQASTPTLPLRRGF 533

Query: 553 DVRRMFSYTRREALELQRDPIRGTLAVLGSVILMFVIGYGINLDVEDLSFAVLDRDDSTI 612
            +RR+ +   RE  EL RD +R   A+LG+V +M + GYGI+LDVE+L+FAV D+D S  
Sbjct: 534 SLRRLLAVAVREGKELLRDKVRLAFALLGAVFMMVIFGYGISLDVENLAFAVHDQDQSPQ 593

Query: 613 SRDYVLDIAGSRYFIEKEPIRDYADMDRRMRDGELSLAIEIPPGFGRDVLRGKTVEVGAW 672
           SR Y+    GSRYF E+ PIRD +++ +R++  E+ LA+EIPPGFGRD+  G+   V AW
Sbjct: 594 SRAYLEAFRGSRYFAEQAPIRDSSELHQRLQRSEIKLALEIPPGFGRDLYAGRQPVVAAW 653

Query: 673 IDGAMPQRAETVRGYVQGMHQTWLARKASEIYGNAATQSSFSIETRYRYNPDVKSLVAMV 732
           +DG MP RAET R YV+ +HQ  L + A         Q    +ETR+RYN DV S+ A+ 
Sbjct: 654 LDGGMPFRAETSRNYVEAVHQANLEQLAKASPQPQPRQDPVRLETRFRYNQDVVSVNAIG 713

Query: 733 PAVIPLLLMLIPAMLAALSVVREKELGSIVNLYVTPTTRLEFLIGKQLPYVALGMLNFLL 792
           P V+ L+L  IPAML AL +VREKELGSI N Y TP TRLEFL+GKQ+PY+A+ ++N  L
Sbjct: 714 PGVMALILAFIPAMLTALGIVREKELGSITNFYATPLTRLEFLLGKQMPYLAVSLVNLAL 773

Query: 793 LTAFAIFIFQVPFTGSYLAYATGALLFVIIATSIGLVMSSFMKSQIAAIFGTALLTLIPA 852
           L A   ++F VP  GS LA A G + +++  TS+GL++S+F ++QIAAI GT ++T +P 
Sbjct: 774 LVAMNRWLFAVPLKGSVLALACGGVAYLLATTSLGLLISAFTRTQIAAILGTMIITSLPT 833

Query: 853 TQYSGMIDPVSSLQGAGAFIGNIYPATYFMTISRGTFSKGLDFAGLSGSFLPLLIAIPLL 912
            Q+SG+I P SSL GA A +G ++PA YF+ I+ GTF+K L    L    L LL      
Sbjct: 834 IQFSGLIVPRSSLDGAAAVMGQLFPAGYFLDIAVGTFTKALGLRELWPQCLILLSFFAAF 893

Query: 913 LIAGAALLRKQ 923
                A+L+KQ
Sbjct: 894 TGLSLAMLKKQ 904