Pairwise Alignments
Query, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58
Subject, 583 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23
Score = 223 bits (569), Expect = 2e-62
Identities = 118/272 (43%), Positives = 167/272 (61%), Gaps = 6/272 (2%)
Query: 252 AFIALLPEEKRKDYHEVHIAPRRVTHDGDYAIEASHLSMRFGDFTAVDNVSFKIPRGEIF 311
AFI LL I P+ TH G+ IEA +L+ +FGDF A D V+F++ RGEIF
Sbjct: 301 AFIDLLGGGPSATSSLAAILPQLDTHRGETVIEARNLTKKFGDFAATDRVNFQVRRGEIF 360
Query: 312 GFLGSNGCGKSTTMKMLTGLLAASEGEAKLFGHKVDASDMAIRHRVGYMSQAFSLYSELT 371
G LG NG GKSTT +M+ GLL ++G+A + + R +GYM+Q FSLY LT
Sbjct: 361 GLLGPNGAGKSTTFRMMCGLLTPTDGQALVLDMDLKTRSGRARQHLGYMAQKFSLYGNLT 420
Query: 372 VRQNLDLHARLFKLPEATIQPRIAEMAERFDLGTVMDTLPDDLPLGIRQRLSLAVAMIHS 431
V QNL + ++ L Q ++ MA+ F+ + PD LP G RQRL+LA A++H
Sbjct: 421 VEQNLRFFSGVYGLRGQHQQDKVDSMAQAFNFRPIFQQTPDALPFGFRQRLALACALMHE 480
Query: 432 PDILILDEPTSGVDPVARDGFWQILADLSRNDNVTIFISTHFMNEAERCDRISLMHAGKV 491
PDIL LDEPTSGVDP R FWQ + + + VT+ ++THFM+EAE CDRI L++ G++
Sbjct: 481 PDILFLDEPTSGVDPFTRREFWQHINGMV-DKGVTVMVTTHFMDEAEYCDRIGLVYRGRL 539
Query: 492 LISDTPDAITKSRNAE-----TLEEAFVAYLE 518
+ S TPD + + ++ T+E+AF+A ++
Sbjct: 540 IASGTPDDLKRQAASDDTPEPTMEQAFIALVQ 571
Score = 159 bits (401), Expect = 6e-43
Identities = 95/236 (40%), Positives = 139/236 (58%), Gaps = 12/236 (5%)
Query: 11 NDPGAPVARLTDVRLAFGSTV--ALADISVEIPAGRMIGLIGPDGVGKSSLLSLISGARA 68
+DP P+ RL + F ALA +S EI AG + GL+GPDG GK++L+ +++G
Sbjct: 3 SDP--PLIRLDALEKRFDGMTKPALAQLSAEIRAGAVTGLVGPDGAGKTTLMRMLAGLLT 60
Query: 69 IQKGNVEVLAGD-MSDPRHREDTCPRIAYMPQGLGKNLYPTLSVFENIDFFGRLFGQDGR 127
G + VL D ++D R R+ YMPQ G LY L+V EN+ + L G G
Sbjct: 61 PSAGAIRVLGLDPIADDRQLH---ARLGYMPQKFG--LYEDLTVMENLTLYADLRGITGD 115
Query: 128 ERKARIAELLKSTGLERFADRPAMKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLS 187
R+A LL+ T L RF R A KLSGGMKQKLGL C L+ P +L+LDEP GVDP+S
Sbjct: 116 IRRATFDRLLQFTDLTRFTTRLAGKLSGGMKQKLGLACTLLGQPGVLLLDEPGVGVDPIS 175
Query: 188 RRQFWELIDSIRAGRPGMSVIVATAYMEEAAGFDWLVAMDGGKILATGSPGELLER 243
RR+ W ++ + GM ++ +T+Y++EA ++ ++ G++L G+P +L +R
Sbjct: 176 RRELWRMVHEL--ADDGMLILWSTSYLDEAEQCRDVLLLNEGELLYRGAPADLTQR 229
Score = 132 bits (331), Expect = 8e-35
Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 283 IEASHLSMRFGDFT--AVDNVSFKIPRGEIFGFLGSNGCGKSTTMKMLTGLLAASEGEAK 340
I L RF T A+ +S +I G + G +G +G GK+T M+ML GLL S G +
Sbjct: 8 IRLDALEKRFDGMTKPALAQLSAEIRAGAVTGLVGPDGAGKTTLMRMLAGLLTPSAGAIR 67
Query: 341 LFGHKVDASDMAIRHRVGYMSQAFSLYSELTVRQNLDLHARLFKLPEATIQPRIAEMAER 400
+ G A D + R+GYM Q F LY +LTV +NL L+A L + + + +
Sbjct: 68 VLGLDPIADDRQLHARLGYMPQKFGLYEDLTVMENLTLYADLRGITGDIRRATFDRLLQF 127
Query: 401 FDLGTVMDTLPDDLPLGIRQRLSLAVAMIHSPDILILDEPTSGVDPVARDGFWQILADLS 460
DL L L G++Q+L LA ++ P +L+LDEP GVDP++R W+++ +L+
Sbjct: 128 TDLTRFTTRLAGKLSGGMKQKLGLACTLLGQPGVLLLDEPGVGVDPISRRELWRMVHELA 187
Query: 461 RNDNVTIFISTHFMNEAERCDRISLMHAGKVLISDTPDAITK 502
+D + I ST +++EAE+C + L++ G++L P +T+
Sbjct: 188 -DDGMLILWSTSYLDEAEQCRDVLLLNEGELLYRGAPADLTQ 228
Score = 130 bits (326), Expect = 3e-34
Identities = 78/258 (30%), Positives = 137/258 (53%), Gaps = 11/258 (4%)
Query: 14 GAPVARLTDVRLAFGSTVALADISVEIPAGRMIGLIGPDGVGKSSLLSLISGARAIQKGN 73
G V ++ FG A ++ ++ G + GL+GP+G GKS+ ++ G G
Sbjct: 328 GETVIEARNLTKKFGDFAATDRVNFQVRRGEIFGLLGPNGAGKSTTFRMMCGLLTPTDGQ 387
Query: 74 VEVLAGDMSDPRHREDTCPRIAYMPQGLGKNLYPTLSVFENIDFFGRLFGQDGRERKARI 133
VL D+ R + YM Q +LY L+V +N+ FF ++G G+ ++ ++
Sbjct: 388 ALVLDMDLKTRSGRARQ--HLGYMAQKF--SLYGNLTVEQNLRFFSGVYGLRGQHQQDKV 443
Query: 134 AELLKSTGLERFADRPAMKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRQFWE 193
+ ++ + L G +Q+L L CAL+H+PD+L LDEPT+GVDP +RR+FW+
Sbjct: 444 DSMAQAFNFRPIFQQTPDALPFGFRQRLALACALMHEPDILFLDEPTSGVDPFTRREFWQ 503
Query: 194 LIDSIRAGRPGMSVIVATAYMEEAAGFDWLVAMDGGKILATGSPGELLER-----TSTAN 248
I+ + G++V+V T +M+EA D + + G+++A+G+P +L + T
Sbjct: 504 HINGM--VDKGVTVMVTTHFMDEAEYCDRIGLVYRGRLIASGTPDDLKRQAASDDTPEPT 561
Query: 249 LDAAFIALLPEEKRKDYH 266
++ AFIAL+ ++ H
Sbjct: 562 MEQAFIALVQAYDQEAEH 579