Pairwise Alignments

Query, 354 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score = 84.3 bits (207), Expect = 5e-21
 Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 20/274 (7%)

Query: 3   KKGLLIGLAVV-VLAIAAYFAWSKLTA---EGLPSGFVASNGRIEAVEIDISTKTAGRLQ 58
           +K  L+GL ++ +LA    +AW  +     E     +V  NG +    ++I+   AG + 
Sbjct: 20  RKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYV--NGNV----VEITPLVAGTVT 73

Query: 59  DIMVREGDFVKAGQVLAQMDTAQLEAKKRQAEAQLRRAKIAIDTAHSLVAQREAEKTSAL 118
            I   +GD V AGQVL Q D A  E   + AEA+L R+   +   +S V   +A+     
Sbjct: 74  SIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYSNVDSLKAQ----- 128

Query: 119 AVVEQRKAQLDSASKTYARSRQLLTGNAVSQQIVDDSEATEQSARATLASAQASLAASDA 178
             +E R+A+L  A + + R + L    A++ + +  +      A+A + SA+  L+ S A
Sbjct: 129 --LETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLSTSSA 186

Query: 179 AINAAKAQIIDAEAAVDAAQADIESIETDIVDATLKSPRDGRVQYRIAQPGEVLSAGGRV 238
            ++     ++ +   V AA AD+     D    TL +P  G V  R  Q G+ L  G   
Sbjct: 187 LVDDT---VVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQPGTAT 243

Query: 239 LNLVDLGDVYMTFFLPTAEAGRTSMGSDVRLILD 272
           + ++ L  V++       +     +G  V +  D
Sbjct: 244 MAVIPLDQVWIDANFKETQLREMRIGQPVEITAD 277