Pairwise Alignments

Query, 354 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 365 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 72/264 (27%)

Query: 38  SNGRIEAV-EIDISTKTAGRLQDIMVREGDFVKAGQVLAQMDTAQLEAKKRQAEAQLRRA 96
           ++G +EAV ++ ++ +  GR+  I    G  V AGQ+L Q++ A  +A + Q +A+LR A
Sbjct: 57  ASGELEAVNQVQVAAEMPGRITRIAFESGQTVAAGQLLVQLNDAPEQALRVQLQARLRNA 116

Query: 97  KIAIDTAHSLVAQREAEKTSALAVVEQRKAQLDSASKTYARSRQLLTGNAVSQQIVDDSE 156
            + +                                    RSR+L   NAVSQ+++D   
Sbjct: 117 DVVLQ-----------------------------------RSRKLRAMNAVSQELLD--- 138

Query: 157 ATEQSARATLASAQASLAASDAAINAAKAQIIDAEAAVDAAQADIESIETDIVDATLKSP 216
                                           +A  AVD A+ +++ +E  I    +++P
Sbjct: 139 --------------------------------NAATAVDVARGELQHVEALIAQKAIRAP 166

Query: 217 RDGRVQYRIAQPGEVLSAGGRVLNLVDLGDVYMTFFLPTAEAGRTSMGSDVRLILDAAPQ 276
             G++  R    G+ L+AG  +++L D+  +++ F L    A     G  + L +DA   
Sbjct: 167 FAGKLGIRRVHQGQYLAAGETIVSLADISQLHVNFALGEQAAPEVHAGQVLALTVDAVRG 226

Query: 277 YTIPAKVSFVADVAQFTPKTVETE 300
               A+V  V  V   T + V+ +
Sbjct: 227 QDFQARVVAVDPVVS-TARLVQVQ 249